Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G5510 Aethionema arabicum HOM05D003594 ORTHO05D004268 4.0e-57 224.6 116 100.0
CARHR029630 Cardamine hirsuta HOM05D003594 ORTHO05D004268 5.2e-20 101.3 79 68.4
Aa31sc91G80 Aethionema arabicum HOM05D003594 ORTHO05D004268 4.4e-19 98.2 79 70.9
AL1G44160 Arabidopsis lyrata HOM05D003594 ORTHO05D004268 1.8e-17 92.8 77 66.2
AT1G30240 Arabidopsis thaliana HOM05D003594 ORTHO05D004268 9.1e-17 90.5 77 64.9
Carub.0001s2847 Capsella rubella HOM05D003594 ORTHO05D004268 9.1e-17 90.5 79 63.3
BcaB03g12203 Brassica carinata HOM05D003594 ORTHO05D004268 4.2e-14 81.6 79 58.2
THA.LOC104820658 Tarenaya hassleriana HOM05D003594 ORTHO05D004268 4.2e-14 81.6 79 58.2
BcaC01g00173 Brassica carinata HOM05D003594 ORTHO05D004268 5.5e-14 81.3 79 59.5
A08p24610 Brassica napus HOM05D003594 ORTHO05D004268 5.5e-14 81.3 79 59.5
C03p76500 Brassica napus HOM05D003594 ORTHO05D004268 5.5e-14 81.3 79 59.5
BraA08t34416Z Brassica rapa HOM05D003594 ORTHO05D004268 5.5e-14 81.3 79 59.5
BolC3t19907H Brassica oleracea HOM05D003594 ORTHO05D004268 7.2e-14 80.9 79 59.5
Sp1g26080 Schrenkiella parvula HOM05D003594 ORTHO05D004268 9.4e-14 80.5 78 60.3
BcaB07g32622 Brassica carinata HOM05D003594 ORTHO05D004268 2.7e-13 79.0 77 58.4
BraA09t39154Z Brassica rapa HOM05D003594 ORTHO05D004268 3.6e-13 78.6 77 57.1
A09p36300 Brassica napus HOM05D003594 ORTHO05D004268 8.0e-13 77.4 77 57.1
Thhalv10006813m.g Eutrema salsugineum HOM05D003594 ORTHO05D004268 1.4e-12 76.6 77 59.7
BcaC05g27050 Brassica carinata HOM05D003594 ORTHO05D004268 2.3e-12 75.9 77 57.1
BolC5t31639H Brassica oleracea HOM05D003594 ORTHO05D004268 2.3e-12 75.9 77 57.1
C05p29080 Brassica napus HOM05D003594 ORTHO05D004268 4.0e-12 75.1 77 57.1
Medtr3g075460 Medicago truncatula HOM05D003594 ORTHO05D004268 3.1e-09 65.5 79 46.8
TPR.G8757 Trifolium pratense HOM05D003594 ORTHO05D004268 1.6e-08 63.2 79 45.6
Ca_23589_v3 Cicer arietinum L. HOM05D003594 ORTHO05D004268 2.7e-08 62.4 79 45.6
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 4.5e-08 61.6 79 45.6
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 7.7e-08 60.8 80 43.8
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 7.7e-08 60.8 77 45.5
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 7.7e-08 60.8 77 49.4
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 2.9e-07 58.9 77 42.9
Actinidia18596 Actinidia chinensis HOM05D003594 ORTHO05D004268 8.6e-07 57.4 80 41.2
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 8.6e-07 57.4 78 42.3
CANSAT56G3624 Cannabis sativa HOM05D003594 ORTHO05D004268 2.5e-06 55.8 79 40.5
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 3.3e-06 55.5 77 44.2
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 4.2e-06 55.1 80 40.0
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 4.2e-06 55.1 78 41.0
Ah.04g162260 Amaranthus hybridus HOM05D003594 ORTHO05D004268 5.5e-06 54.7 79 40.5
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 5.5e-06 54.7 77 39.0
PGR044G2128 Punica granatum HOM05D003594 ORTHO05D004268 5.5e-06 54.7 79 41.8
Haze_25332 Corylus avellana HOM05D003594 ORTHO05D004268 7.2e-06 54.3 78 43.6
Ciclev10027803m.g Citrus clementina HOM05D003594 ORTHO05D004268 9.5e-06 53.9 73 43.8


User provided reference genes

Program Settings