Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.7e-134 483.0 679 100.0
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-132 477.6 679 99.6
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-82 311.2 679 81.1
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-82 311.2 679 81.1
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.4e-78 296.2 680 72.6
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-67 259.6 189 74.6
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.5e-66 258.5 189 74.1
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.6e-66 256.5 183 75.4
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-65 254.2 191 73.8
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-65 254.2 191 73.8
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.7e-62 245.0 191 72.3
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.1e-61 239.6 192 69.3
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.3e-58 230.3 186 69.9
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.4e-55 220.7 188 69.1
Aa31sc233G10 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.5e-47 195.3 189 62.4
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.3e-45 186.0 134 72.4
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-42 178.3 192 57.3
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 2.5e-37 161.4 181 54.7
Aa31LG6G11700 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.9e-36 156.4 291 69.1
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 3.7e-33 147.5 130 62.3
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 1.1e-32 146.0 128 62.5
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 2.4e-32 144.8 166 51.8
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 4.1e-32 144.1 130 54.6
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 3.4e-31 141.0 130 53.8
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 7.7e-31 139.8 130 54.6
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 1.0e-30 139.4 130 54.6
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 2.9e-30 137.9 146 54.1
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 7.4e-26 123.2 159 49.1
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 1.2e-20 105.9 182 39.6
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 6.1e-20 103.6 135 45.2
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 6.1e-20 103.6 175 38.3
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 2.3e-19 101.7 176 41.5
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 4.0e-19 100.9 168 39.9
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 8.8e-19 99.8 136 44.1
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 2.6e-18 98.2 94 58.5
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 3.3e-18 97.8 160 41.9
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.7e-18 97.1 159 39.0
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 7.5e-18 96.7 167 38.3
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 9.7e-18 96.3 159 39.0
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 9.7e-18 96.3 165 37.6
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 1.8e-16 92.0 163 38.7
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 2.4e-16 91.7 140 39.3
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 3.1e-16 91.3 156 39.1
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 7.0e-16 90.1 142 35.9
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 1.2e-15 89.4 140 34.3
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 1.6e-15 89.0 156 37.8
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.6e-15 89.0 138 39.1
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 7.7e-15 86.7 137 40.1
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 7.7e-15 86.7 137 40.1
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 7.7e-15 86.7 125 40.0
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 7.7e-15 86.7 125 42.4
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 1.3e-14 85.9 151 33.8
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 1.3e-14 85.9 154 36.4
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 2.2e-14 85.1 150 35.3
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.2e-14 85.1 168 36.9
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.9e-14 84.7 179 35.8
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 2.9e-14 84.7 157 33.8
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.8e-14 84.3 136 38.2
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 3.8e-14 84.3 160 36.2
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 5.0e-14 84.0 136 38.2
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 6.5e-14 83.6 177 37.3
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 8.5e-14 83.2 158 35.4
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.1e-13 82.8 150 34.0
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.1e-13 82.8 164 36.0
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 1.5e-13 82.4 169 34.3
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 2.5e-13 81.6 163 33.1
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 2.5e-13 81.6 164 37.2
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 2.5e-13 81.6 135 38.5
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.5e-13 81.6 139 38.8
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 3.2e-13 81.3 174 34.5
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 4.2e-13 80.9 150 38.0
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 5.5e-13 80.5 83 49.4
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 7.2e-13 80.1 139 38.1
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 7.2e-13 80.1 137 39.4
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 7.2e-13 80.1 132 37.1
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 1.2e-12 79.3 181 32.0
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.6e-12 79.0 129 38.0
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 1.6e-12 79.0 164 32.9
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 2.7e-12 78.2 192 28.6
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 6.1e-12 77.0 171 32.7
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 6.1e-12 77.0 139 36.7
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 2.3e-11 75.1 93 41.9
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 5.2e-11 73.9 169 32.5
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 3.4e-10 71.2 72 52.8
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 4.4e-10 70.9 105 36.2
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 4.4e-10 70.9 153 35.9
Haze_21398 Corylus avellana HOM05D000162 ORTHO05D000090 1.3e-09 69.3 114 31.6
Aa31sc233G20 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-09 68.6 98 37.8
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 2.2e-09 68.6 163 31.3
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 8.3e-09 66.6 72 45.8
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 2.4e-08 65.1 101 32.7
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 5.4e-08 63.9 103 29.1
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 5.4e-08 63.9 104 29.8
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 5.4e-08 63.9 131 31.3
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 7.0e-08 63.5 86 39.5
RcHm_v2.0_Chr4g0414121 Rosa chinensis HOM05D000162 ORTHO05D000090 7.0e-08 63.5 108 32.4
Actinidia04475 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.6e-07 62.4 168 26.2
Hma1.2p1_1798F.1_g302900 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.6e-07 62.4 104 31.7
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 5.9e-07 60.5 97 34.0
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 5.9e-07 60.5 103 30.1
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 5.9e-07 60.5 103 30.1
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 7.7e-07 60.1 94 33.0
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 7.7e-07 60.1 134 30.6
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 1.0e-06 59.7 75 49.3
CiPaw.08G119600 Carya illinoinensis HOM05D000162 ORTHO05D000090 1.0e-06 59.7 91 34.1
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.0e-06 59.7 107 32.7
PGR044G1745 Punica granatum HOM05D000162 ORTHO05D000090 1.0e-06 59.7 87 36.8
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.3e-06 59.3 89 34.8
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.7e-06 58.9 96 29.2
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 1.7e-06 58.9 103 33.0
CiPaw.08G122500 Carya illinoinensis HOM05D000162 ORTHO05D000090 3.8e-06 57.8 93 32.3
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 3.8e-06 57.8 163 24.5
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 3.8e-06 57.8 90 32.2
vmacro15413 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.8e-06 57.8 171 25.1
Actinidia06229 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.0e-06 57.4 88 34.1
BcaB02g10473 Brassica carinata HOM05D012099 ORTHO05D014504 6.5e-06 57.0 67 47.8
Lj1g0012010 Lotus japonicus HOM05D000162 ORTHO05D000090 6.5e-06 57.0 91 35.2
Medtr6g079890 Medicago truncatula HOM05D000162 ORTHO05D000090 6.5e-06 57.0 175 26.9
Peaxi162Scf00154g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 6.5e-06 57.0 128 31.2
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 8.5e-06 56.6 162 30.2
Gohir.A10G129600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 8.5e-06 56.6 92 35.9
Nitab4.5_0000428g0340 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.5e-06 56.6 130 32.3


User provided reference genes

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