Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G5190 Aethionema arabicum HOM05D000025 ORTHO05D001170 2.8e-45 184.9 90 100.0
BcaC06g32962 Brassica carinata HOM05D000025 ORTHO05D000040 6.2e-13 77.4 55 70.9
BcaC06g30646 Brassica carinata HOM05D000025 ORTHO05D000040 1.1e-12 76.6 57 61.4
A03p52310 Brassica napus HOM05D000025 ORTHO05D000040 1.4e-12 76.3 57 59.6
BraA03t14306Z Brassica rapa HOM05D000025 ORTHO05D000040 1.4e-12 76.3 57 59.6
Aa31LG7G11170 Aethionema arabicum HOM05D000025 ORTHO05D000040 1.8e-12 75.9 53 67.9
A03p52350 Brassica napus HOM05D000025 ORTHO05D000040 4.0e-12 74.7 57 57.9
Aa31LG4G9960 Aethionema arabicum HOM05D000025 ORTHO05D000040 6.9e-12 73.9 53 64.2
Aa31LG4G9940 Aethionema arabicum HOM05D000025 ORTHO05D000040 1.2e-11 73.2 55 63.6
Sp7g14120 Schrenkiella parvula HOM05D000025 ORTHO05D000040 1.2e-11 73.2 57 64.9
Aa31LG7G11180 Aethionema arabicum HOM05D000025 ORTHO05D019514 2.6e-11 72.0 53 64.2
BcaB03g11662 Brassica carinata HOM05D000025 ORTHO05D000040 2.6e-11 72.0 58 58.6
A01p11940 Brassica napus HOM05D000025 ORTHO05D000040 4.4e-11 71.2 57 63.2
BraA01t01136Z Brassica rapa HOM05D000025 ORTHO05D000040 4.4e-11 71.2 57 63.2
AT2G30750 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 5.8e-11 70.9 54 61.1
BcaNung03714 Brassica carinata HOM05D000025 ORTHO05D000040 5.8e-11 70.9 57 63.2
Carub.0004s1194 Capsella rubella HOM05D000025 ORTHO05D000040 7.6e-11 70.5 54 57.4
Carub.0004s1196 Capsella rubella HOM05D000025 ORTHO05D000040 9.9e-11 70.1 54 55.6
BcaC09g50268 Brassica carinata HOM05D000025 ORTHO05D000040 1.3e-10 69.7 52 65.4
C01p27130 Brassica napus HOM05D000025 ORTHO05D000040 1.3e-10 69.7 52 65.4
BolC1t02659H Brassica oleracea HOM05D000025 ORTHO05D000040 1.3e-10 69.7 52 65.4
CARHR188470 Cardamine hirsuta HOM05D000025 ORTHO05D000040 1.3e-10 69.7 50 66.0
Carub.0004s1198 Capsella rubella HOM05D000025 ORTHO05D000040 1.7e-10 69.3 54 59.3
Carub.0004s1197 Capsella rubella HOM05D000025 ORTHO05D000040 2.2e-10 68.9 54 61.1
Carub.0008s0405 Capsella rubella HOM05D000025 ORTHO05D000040 2.2e-10 68.9 58 55.2
AL4G25680 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 2.9e-10 68.6 54 59.3
AT2G30770 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 2.9e-10 68.6 54 59.3
A01p21810 Brassica napus HOM05D000025 ORTHO05D000040 2.9e-10 68.6 52 65.4
C07p50790 Brassica napus HOM05D000025 ORTHO05D000040 2.9e-10 68.6 58 55.2
BraA01t02089Z Brassica rapa HOM05D000025 ORTHO05D000040 2.9e-10 68.6 52 65.4
Aa31LG6G2660 Aethionema arabicum HOM05D000025 ORTHO05D000040 3.8e-10 68.2 52 63.5
AL4G25660 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 3.8e-10 68.2 54 57.4
Carub.0006s2745 Capsella rubella HOM05D000025 ORTHO05D000040 3.8e-10 68.2 56 62.5
Carub.0006s2746 Capsella rubella HOM05D000025 ORTHO05D000040 8.4e-10 67.0 56 51.8
Carub.0007s2092 Capsella rubella HOM05D000025 ORTHO05D000040 1.1e-09 66.6 57 57.9
CARHR188490 Cardamine hirsuta HOM05D000025 ORTHO05D000040 1.1e-09 66.6 50 62.0
Aa31LG11G9660 Aethionema arabicum HOM05D000025 ORTHO05D000040 1.4e-09 66.2 51 56.9
AT5G42590 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 1.4e-09 66.2 53 60.4
Aa31LG6G2630 Aethionema arabicum HOM05D000025 ORTHO05D000040 2.4e-09 65.5 47 66.0
AT5G24960 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 2.4e-09 65.5 50 62.0
BcaNung00247 Brassica carinata HOM05D000025 ORTHO05D000040 5.4e-09 64.3 52 59.6
Aa31sc251G40 Aethionema arabicum HOM05D000025 ORTHO05D000040 7.1e-09 63.9 52 51.9
AT5G24950 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 1.2e-08 63.2 51 58.8
Carub.0006s2282 Capsella rubella HOM05D000025 ORTHO05D000040 1.6e-08 62.8 50 60.0
Thhalv10024976m.g Eutrema salsugineum HOM05D000025 ORTHO05D000040 2.1e-08 62.4 60 53.3
AL6G36620 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 2.7e-08 62.0 51 58.8
C02p60100 Brassica napus HOM05D000025 ORTHO05D000040 2.7e-08 62.0 53 56.6
BraA02t08980Z Brassica rapa HOM05D000025 ORTHO05D000040 2.7e-08 62.0 53 56.6
AT4G13290 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 3.5e-08 61.6 48 62.5
AT4G13310 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 3.5e-08 61.6 48 62.5
Carub.0007s2932 Capsella rubella HOM05D000025 ORTHO05D000040 3.5e-08 61.6 48 60.4
Sp7g12870 Schrenkiella parvula HOM05D000025 ORTHO05D000040 3.5e-08 61.6 59 52.5
BcaB02g07719 Brassica carinata HOM05D000025 ORTHO05D000040 6.0e-08 60.8 47 61.7
Carub.0007s2653 Capsella rubella HOM05D000025 ORTHO05D000040 6.0e-08 60.8 52 55.8
A03p17200 Brassica napus HOM05D000025 ORTHO05D000040 1.0e-07 60.1 50 56.0
BraA03t10993Z Brassica rapa HOM05D000025 ORTHO05D000040 1.0e-07 60.1 50 56.0
A02p40130 Brassica napus HOM05D000025 ORTHO05D000040 2.3e-07 58.9 53 54.7
Carub.0007s2652 Capsella rubella HOM05D000025 ORTHO05D000040 2.3e-07 58.9 53 56.6
BcaC01g06014 Brassica carinata HOM05D000025 ORTHO05D000040 3.0e-07 58.5 50 54.0
C03p20300 Brassica napus HOM05D000025 ORTHO05D000040 3.0e-07 58.5 50 54.0
CARHR218850 Cardamine hirsuta HOM05D000025 ORTHO05D000040 3.0e-07 58.5 48 60.4
BcaNung02003 Brassica carinata HOM05D001308 ORTHO05D001170 5.1e-07 57.8 50 56.0
BolC7t44831H Brassica oleracea HOM05D000025 ORTHO05D032329 5.1e-07 57.8 50 54.0
AL9U10390 Arabidopsis lyrata HOM05D000025 ORTHO05D019514 6.6e-07 57.4 47 57.4
Sp7g10800 Schrenkiella parvula HOM05D000025 ORTHO05D000040 8.7e-07 57.0 48 58.3
BolC3t14405H Brassica oleracea HOM05D000025 ORTHO05D000040 1.5e-06 56.2 50 52.0
BcaC09g50155 Brassica carinata HOM05D000025 ORTHO05D000040 1.9e-06 55.8 55 50.9
A01p22830 Brassica napus HOM05D000025 ORTHO05D000040 1.9e-06 55.8 55 50.9
BolC1t02770H Brassica oleracea HOM05D000025 ORTHO05D000040 1.9e-06 55.8 55 50.9
BraA01t02197Z Brassica rapa HOM05D000025 ORTHO05D000040 1.9e-06 55.8 55 50.9
Aa31LG11G9680 Aethionema arabicum HOM05D000025 ORTHO05D000040 2.5e-06 55.5 51 47.1
C01p28410 Brassica napus HOM05D000025 ORTHO05D000040 3.3e-06 55.1 53 50.9
Glyma.16G195600 Glycine max HOM05D000025 ORTHO05D000040 5.6e-06 54.3 52 51.9


User provided reference genes

Program Settings