Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 9.3e-161 570.1 275 100.0
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 4.7e-112 408.3 272 71.0
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 7.5e-110 401.0 272 69.1
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.8e-108 396.4 279 68.5
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 3.1e-108 395.6 270 70.4
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 2.0e-107 392.9 279 67.4
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 2.0e-107 392.9 279 67.4
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 7.7e-107 391.0 268 70.1
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.7e-106 389.8 279 67.7
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.7e-106 389.8 279 67.7
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 3.0e-103 379.0 270 65.9
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 3.0e-103 379.0 274 63.5
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 1.4e-100 370.2 268 67.5
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 2.9e-98 362.5 279 63.8
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.1e-97 360.5 279 63.4
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 5.6e-97 358.2 279 63.1
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 3.6e-96 355.5 255 65.1
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 3.1e-95 352.4 255 66.7
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 2.2e-93 346.3 255 63.1
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 8.3e-93 344.4 255 62.7
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 1.1e-92 344.0 254 63.0
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 7.0e-92 341.3 255 62.7
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 1.6e-91 340.1 255 63.5
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 1.6e-91 340.1 255 63.5
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 3.5e-91 339.0 255 62.7
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 6.0e-91 338.2 255 64.7
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 1.3e-90 337.0 255 61.2
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.3e-90 337.0 255 63.1
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 1.7e-90 336.7 247 65.2
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 2.3e-90 336.3 255 61.6
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 3.9e-90 335.5 254 60.6
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 3.9e-90 335.5 254 61.0
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 3.3e-89 332.4 255 60.0
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 5.6e-89 331.6 268 58.6
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 7.3e-89 331.3 255 61.6
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 9.5e-89 330.9 255 61.2
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.2e-88 330.5 255 60.4
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 1.6e-88 330.1 255 59.6
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 2.1e-88 329.7 253 60.9
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 2.1e-88 329.7 253 61.7
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 3.6e-88 328.9 253 60.1
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 6.2e-88 328.2 255 60.4
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 8.1e-88 327.8 270 58.9
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.1e-87 327.4 253 61.3
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.2e-86 323.9 253 60.5
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 2.0e-86 323.2 255 58.4
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 5.8e-86 321.6 255 57.6
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 9.8e-86 320.9 255 58.0
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 2.9e-85 319.3 257 57.6
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 4.9e-85 318.5 254 57.9
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 6.4e-85 318.2 256 57.8
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 3.2e-84 315.8 253 60.9
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 1.6e-83 313.5 255 59.2
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 4.6e-83 312.0 250 60.0
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 6.0e-83 311.6 255 56.5
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 6.0e-83 311.6 254 56.7
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 1.0e-82 310.8 256 58.2
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 3.9e-82 308.9 255 55.3
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 1.1e-81 307.4 256 55.9
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 7.6e-78 294.7 254 54.7
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 2.9e-77 292.7 253 56.1
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 2.9e-77 292.7 254 54.3
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 4.6e-75 285.4 226 59.7
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 1.0e-74 284.3 253 51.4
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 4.3e-73 278.9 255 53.7
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 2.1e-72 276.6 214 61.2
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.8e-72 276.2 254 52.4
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 2.0e-70 270.0 225 56.9
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.9e-69 266.2 244 52.5
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 6.5e-45 185.3 246 37.8
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.2e-44 183.0 276 38.8
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 1.6e-40 170.6 172 48.3
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 1.2e-38 164.5 141 59.6
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 3.4e-38 162.9 252 36.9
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.9e-28 130.6 276 28.6
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 1.4e-23 114.4 117 48.7
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 2.5e-20 103.6 124 46.0
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 3.1e-15 86.7 156 32.7


User provided reference genes

Program Settings