Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 3.4e-166 588.2 287 100.0
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.4e-154 549.7 287 92.3
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.8e-154 549.3 287 92.3
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 4.0e-154 548.1 287 92.0
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 2.6e-153 545.4 287 92.0
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.4e-151 539.7 287 90.2
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.4e-151 538.9 288 90.3
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 2.0e-150 535.8 288 89.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.2e-149 532.3 289 89.3
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.5e-148 528.9 289 88.2
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.5e-148 528.9 283 90.8
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 8.6e-141 503.8 273 89.0
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.6e-139 499.6 273 87.9
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.6e-139 499.6 273 87.9
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.2e-136 489.2 285 82.5
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.1e-135 486.9 282 81.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 4.1e-135 485.0 282 81.6
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 7.0e-135 484.2 288 78.8
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 4.5e-134 481.5 288 78.1
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.3e-133 479.9 288 77.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 2.3e-133 479.2 282 80.1
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 2.3e-133 479.2 285 79.3
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.9e-133 478.8 284 80.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 3.8e-133 478.4 288 77.4
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.1e-132 476.9 288 76.7
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.5e-132 476.5 286 78.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.5e-132 475.7 284 79.2
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.3e-132 474.9 288 76.7
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 7.3e-132 474.2 288 77.1
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 9.5e-132 473.8 284 78.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.6e-131 473.0 282 79.8
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 2.8e-131 472.2 284 76.4
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.6e-131 471.9 284 79.2
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 6.1e-131 471.1 284 78.2
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.8e-130 469.5 284 78.2
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 6.8e-130 467.6 286 78.3
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 3.4e-129 465.3 286 76.9
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 7.5e-129 464.2 288 76.4
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.3e-128 463.4 286 76.2
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 4.9e-128 461.5 283 77.7
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 6.4e-128 461.1 286 75.5
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 8.3e-128 460.7 286 76.2
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 8.3e-128 460.7 283 77.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.1e-127 460.3 283 77.4
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.1e-127 460.3 283 77.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-127 460.3 288 76.4
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.9e-127 459.5 281 76.5
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.9e-127 459.5 283 77.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.2e-127 458.8 278 79.1
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 4.1e-127 458.4 288 76.7
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 2.7e-126 455.7 271 80.1
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 3.5e-126 455.3 281 75.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 6.0e-126 454.5 284 74.3
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.7e-125 453.0 295 73.2
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 2.3e-125 452.6 284 73.2
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.6e-125 451.1 285 75.1
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.6e-125 450.7 286 73.8
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 1.5e-124 449.9 285 75.1
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.3e-124 448.7 286 74.1
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 3.3e-124 448.7 282 74.5
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 9.5e-124 447.2 283 74.9
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.6e-123 446.4 291 73.5
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.6e-123 446.4 281 75.4
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.6e-123 446.4 284 72.5
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.6e-123 445.3 284 72.2
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 3.6e-123 445.3 285 72.6
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.4e-122 443.4 287 71.8
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.1e-122 442.2 308 69.8
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 3.1e-122 442.2 284 75.4
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.2e-122 441.4 288 70.5
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 5.2e-122 441.4 287 71.8
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.2e-120 436.0 329 64.7
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.4e-119 433.3 282 71.6
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.4e-119 433.3 280 71.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.9e-119 433.0 286 68.5
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.9e-119 433.0 282 73.0
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.9e-119 433.0 286 68.9
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.9e-119 433.0 285 71.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.2e-119 432.2 288 69.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.2e-118 430.3 286 70.6
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 6.0e-118 427.9 287 71.4
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.3e-117 426.8 286 68.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 4.3e-116 421.8 289 70.2
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 5.6e-116 421.4 286 67.8
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 3.1e-114 415.6 276 70.3
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 4.4e-113 411.8 281 67.6
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 8.3e-112 407.5 269 69.9
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 3.2e-111 405.6 280 66.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 7.8e-110 401.0 265 70.6
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 2.3e-109 399.4 251 74.9
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.2e-107 393.7 261 70.1
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.2e-104 382.9 246 72.4
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 4.2e-103 378.6 278 64.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.7e-101 373.2 280 64.3
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 5.1e-101 371.7 260 66.5
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.6e-99 366.7 281 63.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 3.8e-96 355.5 239 72.0
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.6e-94 350.1 213 77.5
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 8.4e-88 327.8 262 58.0
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.3e-72 277.3 174 75.9
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.1e-70 270.0 258 48.1
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.5e-68 263.8 253 50.2
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.3e-68 262.7 252 50.4
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.1e-66 256.1 259 48.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-51 206.8 152 67.8
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.2e-46 191.0 110 80.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 6.1e-46 188.7 253 39.9
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.3e-43 181.0 304 38.8
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.1e-42 177.9 196 49.0
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 3.8e-40 169.5 102 75.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 3.8e-40 169.5 143 61.5
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.2e-35 153.7 94 76.6
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-32 143.7 95 69.5
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 5.5e-31 139.0 87 72.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.8e-29 131.7 77 77.9
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.2e-23 112.8 67 79.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 9.5e-23 111.7 72 73.6
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 7.8e-09 65.5 40 70.0
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.6e-06 57.8 48 64.6


User provided reference genes

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