Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.3e-224 782.7 403 100.0
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 2.8e-182 642.1 409 84.1
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 8.5e-179 630.6 409 82.9
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 3.3e-175 618.6 408 81.6
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 1.7e-174 616.3 410 81.0
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 2.8e-174 615.5 405 81.0
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 9.1e-173 610.5 405 80.0
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 2.2e-171 605.9 403 80.1
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 1.1e-170 603.6 409 80.0
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 1.5e-170 603.2 403 79.7
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 2.5e-170 602.4 403 79.9
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 4.2e-170 601.7 403 79.9
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 2.1e-169 599.4 406 79.6
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 2.0e-159 566.2 403 73.4
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 7.3e-130 468.0 405 62.7
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 7.3e-130 468.0 408 62.0
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 3.1e-128 462.6 397 62.0
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 3.1e-128 462.6 403 62.8
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 5.2e-128 461.8 405 60.2
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 6.8e-128 461.5 388 63.7
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 2.6e-127 459.5 388 63.7
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 5.8e-127 458.4 370 65.9
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 1.7e-126 456.8 377 65.0
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 2.9e-126 456.1 412 60.4
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 6.4e-126 454.9 399 62.2
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 1.4e-125 453.8 384 64.1
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 7.1e-125 451.4 371 64.4
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 1.6e-124 450.3 413 58.6
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 4.6e-124 448.7 436 57.3
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 6.0e-124 448.4 392 60.5
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 1.3e-123 447.2 407 59.5
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 1.3e-123 447.2 408 61.0
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 3.9e-123 445.7 373 62.5
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 3.9e-123 445.7 373 62.7
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 3.9e-123 445.7 407 60.4
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 5.1e-123 445.3 385 62.9
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 8.6e-123 444.5 375 62.4
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 8.6e-123 444.5 390 62.8
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 2.5e-122 443.0 371 65.0
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 4.3e-122 442.2 376 62.8
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 9.6e-122 441.0 371 61.7
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 2.1e-121 439.9 358 64.8
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 2.8e-121 439.5 390 61.3
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 2.8e-121 439.5 405 59.0
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 4.7e-121 438.7 417 58.5
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 6.2e-121 438.3 433 58.4
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 6.2e-121 438.3 408 59.3
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 1.1e-120 437.6 368 62.2
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 1.1e-120 437.6 368 62.2
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 3.1e-120 436.0 384 61.7
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 4.0e-120 435.6 355 63.4
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 4.0e-120 435.6 406 58.4
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 5.2e-120 435.3 436 55.7
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 5.2e-120 435.3 388 61.3
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 8.9e-120 434.5 358 63.7
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 1.5e-119 433.7 360 63.9
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 2.0e-119 433.3 388 61.1
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 2.6e-119 433.0 372 62.6
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 7.6e-119 431.4 357 64.4
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 9.9e-119 431.0 388 61.1
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 9.9e-119 431.0 366 62.0
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 9.9e-119 431.0 362 63.8
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 2.9e-118 429.5 390 60.5
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 8.4e-118 427.9 418 58.4
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 1.9e-117 426.8 395 58.2
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 3.2e-117 426.0 395 58.2
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 4.2e-117 425.6 402 59.5
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 4.2e-117 425.6 376 60.9
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 5.4e-117 425.2 372 61.6
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 5.4e-117 425.2 368 61.7
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 9.3e-117 424.5 391 59.3
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 1.6e-116 423.7 374 61.2
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 2.1e-116 423.3 423 56.7
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 3.5e-116 422.5 400 59.0
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 1.3e-115 420.6 370 61.4
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 3.9e-115 419.1 371 60.1
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 6.6e-115 418.3 394 58.6
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 1.9e-114 416.8 404 58.9
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.9e-114 416.8 350 62.9
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 2.5e-114 416.4 371 59.6
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 4.3e-114 415.6 392 58.4
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 7.3e-114 414.8 370 58.1
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 9.6e-114 414.5 420 55.5
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 2.1e-113 413.3 392 57.7
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 2.8e-113 412.9 391 58.6
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 8.1e-113 411.4 373 59.2
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 2.4e-112 409.8 371 58.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 2.4e-112 409.8 289 71.6
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 4.0e-112 409.1 289 72.0
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 3.4e-111 406.0 406 58.4
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 5.8e-111 405.2 289 70.6
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.7e-110 403.7 399 56.6
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 2.2e-110 403.3 388 58.5
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 4.9e-110 402.1 394 57.9
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 4.9e-110 402.1 401 55.9
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 1.4e-109 400.6 419 54.2
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 9.3e-109 397.9 376 58.5
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 1.6e-108 397.1 382 56.5
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 1.3e-107 394.0 373 57.6
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 1.8e-107 393.7 390 58.2
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 2.3e-107 393.3 377 58.1
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 2.3e-107 393.3 370 57.6
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 3.0e-107 392.9 370 59.2
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 3.0e-107 392.9 370 59.2
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 5.1e-107 392.1 395 57.5
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 5.1e-107 392.1 340 62.6
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 6.7e-107 391.7 352 59.4
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 8.7e-107 391.3 371 59.3
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 8.7e-107 391.3 377 57.8
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 8.7e-107 391.3 371 59.3
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 1.1e-106 391.0 373 58.7
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 1.5e-106 390.6 378 55.8
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 3.3e-106 389.4 377 57.6
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 4.3e-106 389.0 366 58.7
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 5.6e-106 388.7 370 58.6
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 5.6e-106 388.7 357 55.7
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 9.6e-106 387.9 372 58.1
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 4.8e-105 385.6 391 55.0
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 6.2e-105 385.2 381 55.6
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 1.1e-104 384.4 366 58.2
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 2.4e-104 383.3 361 56.8
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 6.9e-104 381.7 372 57.3
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.7e-102 377.1 376 56.6
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 2.9e-102 376.3 375 55.2
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 2.1e-100 370.2 373 54.2
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 2.7e-100 369.8 274 68.6
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 6.0e-100 368.6 371 52.3
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 2.3e-99 366.7 292 60.6
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 1.8e-96 357.1 357 54.1
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 4.0e-96 355.9 367 54.8
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 1.2e-95 354.4 378 53.7
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 6.0e-92 342.0 285 62.5
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 2.6e-87 326.6 393 47.8
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 6.5e-86 322.0 344 50.6
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 6.5e-86 322.0 369 51.5
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 2.5e-85 320.1 287 59.6
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.5e-82 310.8 252 63.9
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.4e-80 303.5 249 61.0
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 4.5e-71 272.7 204 66.7
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 1.7e-57 227.6 293 41.0
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 3.7e-57 226.5 302 39.4
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 1.1e-48 198.4 156 64.1
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 1.1e-48 198.4 172 61.0
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 2.8e-41 173.7 258 41.9
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 6.8e-27 125.9 248 35.9
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 8.3e-25 119.0 124 53.2
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 1.1e-21 108.6 106 55.7
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 5.6e-21 106.3 282 28.4
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 9.5e-21 105.5 175 40.0
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 4.4e-18 96.7 149 45.6
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 1.6e-15 88.2 56 73.2
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 1.6e-12 78.2 70 57.1
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 6.8e-11 72.8 115 39.1


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