Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 8.4e-124 447.2 253 100.0
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 5.2e-73 278.5 291 62.5
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.1e-72 277.3 289 61.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 9.7e-72 274.2 280 63.9
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 1.7e-71 273.5 288 62.8
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 8.2e-71 271.2 299 61.9
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.3e-68 263.8 295 60.7
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.7e-68 263.5 288 61.1
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 5.0e-68 261.9 297 60.3
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 1.2e-66 257.3 296 60.5
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 1.6e-66 256.9 298 59.1
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 2.1e-66 256.5 296 60.1
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 5.7e-64 248.4 227 70.0
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.5e-51 207.2 292 51.4
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 2.9e-44 183.0 260 50.0
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.1e-43 181.0 262 48.5
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.1e-38 162.5 261 45.2
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.2e-37 161.0 261 45.2
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 6.6e-36 155.2 265 43.4
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 8.6e-36 154.8 252 45.6
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.5e-35 154.1 260 45.0
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 2.5e-35 153.3 259 42.9
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.6e-34 150.6 260 43.1
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.1e-34 150.2 255 43.5
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.6e-34 149.4 249 47.0
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 4.7e-34 149.1 260 42.7
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.1e-33 147.9 259 42.9
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.4e-33 147.5 260 45.8
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.3e-33 146.7 260 42.7
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 2.3e-33 146.7 254 44.9
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 4.0e-33 146.0 259 41.3
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 6.8e-33 145.2 261 43.7
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 6.8e-33 145.2 254 44.1
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.2e-32 144.4 255 43.1
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.2e-32 144.4 265 44.2
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.0e-32 143.7 244 41.4
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.6e-32 143.3 255 45.5
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.4e-32 142.9 253 41.9
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 3.4e-32 142.9 257 42.8
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 4.4e-32 142.5 255 42.0
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 5.8e-32 142.1 257 43.6
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 7.5e-32 141.7 259 40.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 9.8e-32 141.4 258 42.2
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 9.8e-32 141.4 248 43.1
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.7e-31 140.6 262 42.0
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.2e-31 140.2 261 43.7
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.9e-31 139.8 254 42.1
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 6.4e-31 138.7 244 38.1
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 6.4e-31 138.7 266 43.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 8.3e-31 138.3 259 40.2
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.1e-30 137.9 264 40.5
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.4e-30 137.5 268 40.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.9e-30 137.1 259 41.3
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 3.2e-30 136.3 319 37.3
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 5.4e-30 135.6 257 42.4
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 5.4e-30 135.6 253 43.9
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 9.2e-30 134.8 262 42.7
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.0e-29 133.7 244 40.2
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 7.8e-29 131.7 290 40.7
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 7.8e-29 131.7 236 43.6
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 7.8e-29 131.7 258 43.0
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.7e-28 130.6 257 40.9
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 2.3e-28 130.2 265 41.5
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 3.9e-28 129.4 260 40.0
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 5.0e-28 129.0 249 41.0
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 6.6e-28 128.6 264 42.0
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 6.6e-28 128.6 259 43.2
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 6.6e-28 128.6 259 39.4
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 4.3e-27 125.9 256 40.2
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 3.6e-26 122.9 232 42.2
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 3.6e-26 122.9 232 42.2
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.3e-25 120.2 216 41.2
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 5.2e-25 119.0 234 41.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.2e-24 117.9 261 37.5
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.5e-24 117.5 260 39.2
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 2.6e-24 116.7 254 39.0
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 3.4e-24 116.3 243 41.6
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 4.4e-24 115.9 261 41.8
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 8.3e-23 111.7 223 37.2
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.4e-22 110.9 282 37.9
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.9e-22 110.5 252 36.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.4e-22 110.2 236 36.9
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 2.4e-22 110.2 258 38.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.3e-19 99.8 236 37.3
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 9.5e-19 98.2 207 34.3
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.7e-18 95.9 238 39.9
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 8.1e-18 95.1 233 37.3
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.4e-17 93.6 157 40.8
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.4e-17 93.6 137 44.5
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 2.4e-17 93.6 237 36.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 2.4e-17 93.6 202 38.6
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.2e-16 91.3 282 34.4
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.8e-16 89.0 210 35.2
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 9.9e-16 88.2 136 44.1
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 2.9e-15 86.7 215 34.9
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 2.9e-15 86.7 189 39.2
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 3.8e-15 86.3 267 31.1
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 7.1e-14 82.0 220 34.1
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 6.0e-13 79.0 196 38.8
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.0e-12 78.2 232 37.9
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.7e-12 77.4 234 32.1
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.2e-07 60.5 172 34.3
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 3.8e-07 59.7 169 34.9
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.8e-07 59.7 75 42.7
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 4.2e-06 56.2 45 62.2


User provided reference genes

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