Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G2780 Aethionema arabicum HOM05D001151 ORTHO05D006836 1.3e-76 289.7 150 100.0
AT4G20390 Arabidopsis thaliana HOM05D001151 ORTHO05D006836 9.6e-35 150.6 113 71.7
A08p14840 Brassica napus HOM05D001151 ORTHO05D006836 1.6e-34 149.8 113 70.8
BraA08t33468Z Brassica rapa HOM05D001151 ORTHO05D006836 1.6e-34 149.8 113 70.8
Sp7g18760 Schrenkiella parvula HOM05D001151 ORTHO05D006836 3.7e-34 148.7 113 69.9
AL7G33500 Arabidopsis lyrata HOM05D001151 ORTHO05D006836 6.2e-34 147.9 113 71.7
BcaB03g11671 Brassica carinata HOM05D001151 ORTHO05D006836 8.1e-34 147.5 113 69.0
Thhalv10026298m.g Eutrema salsugineum HOM05D001151 ORTHO05D006836 4.0e-33 145.2 99 76.8
BcaC01g00668 Brassica carinata HOM05D001151 ORTHO05D006836 6.9e-33 144.4 113 69.0
C03p82910 Brassica napus HOM05D001151 ORTHO05D006836 6.9e-33 144.4 113 69.0
BolC3t20574H Brassica oleracea HOM05D001151 ORTHO05D006836 6.9e-33 144.4 113 68.1
CARHR227220 Cardamine hirsuta HOM05D001151 ORTHO05D006836 1.2e-32 143.7 113 71.7
SpUn0524_0010 Schrenkiella parvula HOM05D001151 ORTHO05D006836 4.9e-31 138.3 101 74.3
AL8G15270 Arabidopsis lyrata HOM05D001151 ORTHO05D006836 1.4e-30 136.7 101 75.2
AT5G44550 Arabidopsis thaliana HOM05D001151 ORTHO05D006836 1.9e-30 136.3 101 74.3
CARHR178560 Cardamine hirsuta HOM05D001151 ORTHO05D006836 1.9e-30 136.3 101 74.3
Thhalv10001033m.g Eutrema salsugineum HOM05D001151 ORTHO05D006836 1.9e-30 136.3 101 74.3
Aa31LG9G8660 Aethionema arabicum HOM05D001151 ORTHO05D006836 4.2e-30 135.2 99 76.8
C07p27420 Brassica napus HOM05D001151 ORTHO05D006836 5.5e-30 134.8 101 72.3
BcaC06g34540 Brassica carinata HOM05D001151 ORTHO05D006836 7.1e-30 134.4 101 72.3
A06p47100 Brassica napus HOM05D001151 ORTHO05D006836 7.1e-30 134.4 101 72.3
BolC7t43272H Brassica oleracea HOM05D001151 ORTHO05D006836 7.1e-30 134.4 101 72.3
BraA06t27582Z Brassica rapa HOM05D001151 ORTHO05D006836 7.1e-30 134.4 101 72.3
Carub.0008s0395 Capsella rubella HOM05D001151 ORTHO05D006836 1.2e-29 133.7 101 73.3
BcaC06g31607 Brassica carinata HOM05D001151 ORTHO05D006836 2.7e-29 132.5 101 72.3
BcaC03g16673 Brassica carinata HOM05D001151 ORTHO05D006836 6.0e-29 131.3 101 69.3
BcaB07g30519 Brassica carinata HOM05D001151 ORTHO05D006836 7.9e-29 131.0 101 71.3
C02p45080 Brassica napus HOM05D001151 ORTHO05D006836 3.9e-28 128.6 101 69.3
BolC2t10546H Brassica oleracea HOM05D001151 ORTHO05D006836 3.9e-28 128.6 101 69.3
A02p28460 Brassica napus HOM05D001151 ORTHO05D006836 1.1e-27 127.1 101 68.3
BraA02t07881Z Brassica rapa HOM05D001151 ORTHO05D006836 1.1e-27 127.1 101 68.3
Potri.011G154900 Populus trichocarpa HOM05D001151 ORTHO05D006836 1.1e-27 127.1 114 61.4
Carub.0007s2077 Capsella rubella HOM05D001151 ORTHO05D006836 3.3e-27 125.6 85 78.8
Ciclev10016765m.g Citrus clementina HOM05D001151 ORTHO05D006836 3.3e-27 125.6 99 66.7
Sabra11G0144800 Salix brachista HOM05D001151 ORTHO05D006836 4.3e-27 125.2 113 58.4
Cfa000752 Carpinus fangiana HOM05D001151 ORTHO05D006836 7.4e-27 124.4 102 65.7
vmacro10996 Vaccinium macrocarpon HOM05D001151 ORTHO05D006836 1.3e-26 123.6 116 61.2
Manes.03G069600 Manihot esculenta HOM05D001151 ORTHO05D006836 1.6e-26 123.2 103 62.1
Sabra16G0298900 Salix brachista HOM05D001151 ORTHO05D006836 6.2e-26 121.3 99 64.6
Rhsim02G0167800 Rhododendron simsii HOM05D001151 ORTHO05D006836 1.4e-25 120.2 98 65.3
Sabra16G0300800 Salix brachista HOM05D001151 ORTHO05D006836 1.4e-25 120.2 114 58.8
QL05p063075 Quercus lobata HOM05D001151 ORTHO05D006836 4.0e-25 118.6 99 63.6
RcHm_v2.0_Chr5g0018351 Rosa chinensis HOM05D001151 ORTHO05D006836 4.0e-25 118.6 94 71.3
Eucgr.A00513 Eucalyptus grandis HOM05D001151 ORTHO05D006836 5.3e-25 118.2 96 65.6
CSS0028548 Camellia sinensis var. sinensis HOM05D001151 ORTHO05D006836 6.9e-25 117.9 114 58.8
DCAR_007799 Daucus carota HOM05D001151 ORTHO05D006836 6.9e-25 117.9 96 60.4
PGR083G0430 Punica granatum HOM05D001151 ORTHO05D006836 6.9e-25 117.9 98 65.3
Potri.001G442300 Populus trichocarpa HOM05D001151 ORTHO05D006836 1.2e-24 117.1 115 54.8
Cpa.g.sc832.1 Carica papaya HOM05D001151 ORTHO05D006836 2.0e-24 116.3 98 61.2
Thecc.06G005200 Theobroma cacao HOM05D001151 ORTHO05D006836 2.6e-24 115.9 99 59.6
Oeu060327.1 Olea europaea HOM05D001151 ORTHO05D006836 5.8e-24 114.8 95 64.2
TWI38G0934 Tripterygium wilfordii HOM05D001151 ORTHO05D006836 5.8e-24 114.8 98 60.2
TWI63G0399 Tripterygium wilfordii HOM05D001151 ORTHO05D006836 7.6e-24 114.4 95 63.2
Dinv11973 Davidia involucrata HOM05D001151 ORTHO05D006836 1.0e-23 114.0 101 60.4
Phvul.009G218200 Phaseolus vulgaris HOM05D001151 ORTHO05D006836 1.3e-23 113.6 114 56.1
CiPaw.09G149300 Carya illinoinensis HOM05D001151 ORTHO05D006836 2.9e-23 112.5 113 57.5
Nitab4.5_0002719g0040 Nicotiana tabacum HOM05D001151 ORTHO05D006836 2.9e-23 112.5 113 54.0
Nitab4.5_0006863g0010 Nicotiana tabacum HOM05D001151 ORTHO05D006836 2.9e-23 112.5 113 54.0
GSVIVG01037957001 Vitis vinifera HOM05D001151 ORTHO05D006836 2.9e-23 112.5 102 57.8
Aqoxy4G00085 Aquilegia oxysepala HOM05D001151 ORTHO05D006836 4.9e-23 111.7 95 60.0
Psat1g019520 Pisum sativum HOM05D001151 ORTHO05D006836 6.5e-23 111.3 116 56.0
FvH4_3g11410 Fragaria vesca HOM05D001151 ORTHO05D006836 1.1e-22 110.5 95 63.2
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.1e-22 110.5 95 63.2
FAN25G0432 Fragaria x ananassa HOM05D001151 ORTHO05D006836 1.1e-22 110.5 95 63.2
Peaxi162Scf00670g00341 Petunia axillaris HOM05D001151 ORTHO05D006836 1.4e-22 110.2 108 57.4
Hund21556 Selenicereus undatus HOM05D001151 ORTHO05D006836 1.4e-22 110.2 106 53.8
COL.COLO4_26866 Corchorus olitorius HOM05D001151 ORTHO05D006836 1.9e-22 109.8 102 62.7
Actinidia11300 Actinidia chinensis HOM05D001151 ORTHO05D006836 2.5e-22 109.4 103 62.1
arahy.Tifrunner.gnm1.ann1.S6J9QN Arachis hypogaea HOM05D001151 ORTHO05D006836 2.5e-22 109.4 99 57.6
TPR.G28534 Trifolium pratense HOM05D001151 ORTHO05D006836 2.5e-22 109.4 115 55.7
TPR.G6272 Trifolium pratense HOM05D001151 ORTHO05D006836 2.5e-22 109.4 118 54.2
Cc09_g07160 Coffea canephora HOM05D001151 ORTHO05D006836 3.2e-22 109.0 95 58.9
Solyc02g069730.3 Solanum lycopersicum HOM05D001151 ORTHO05D006836 3.2e-22 109.0 109 55.0
arahy.Tifrunner.gnm1.ann1.RH6BR7 Arachis hypogaea HOM05D001151 ORTHO05D006836 4.2e-22 108.6 99 56.6
Duzib235G0035 Durio zibethinus HOM05D001151 ORTHO05D006836 4.2e-22 108.6 97 59.8
Medtr0097s0070 Medicago truncatula HOM05D001151 ORTHO05D006836 4.2e-22 108.6 115 54.8
CANSAT35G0921 Cannabis sativa HOM05D001151 ORTHO05D006836 5.5e-22 108.2 102 61.8
Gohir.A06G119400 Gossypium hirsutum HOM05D001151 ORTHO05D006836 5.5e-22 108.2 98 59.2
Lj2A338T75 Lonicera japonica HOM05D001151 ORTHO05D006836 5.5e-22 108.2 100 60.0
PSO675G9129 Papaver somniferum HOM05D001151 ORTHO05D006836 7.1e-22 107.8 97 57.7
VMungo1309G2278 Vigna mungo HOM05D001151 ORTHO05D006836 7.1e-22 107.8 99 59.6
Gorai.010G144000 Gossypium raimondii HOM05D001151 ORTHO05D006836 1.2e-21 107.1 98 58.2
Lalb_Chr08g0233151 Lupinus albus HOM05D001151 ORTHO05D006836 1.2e-21 107.1 114 55.3
PSO541G3810 Papaver somniferum HOM05D001151 ORTHO05D006836 1.2e-21 107.1 97 55.7
PSO541G5365 Papaver somniferum HOM05D001151 ORTHO05D006836 1.2e-21 107.1 97 55.7
Sopen02g018850 Solanum pennellii HOM05D001151 ORTHO05D006836 1.2e-21 107.1 109 54.1
PGSC0003DMG400021195 Solanum tuberosum HOM05D001151 ORTHO05D006836 1.2e-21 107.1 92 60.9
ClCG01G008950 Citrullus lanatus HOM05D001151 ORTHO05D006836 1.6e-21 106.7 111 55.9
Prupe.4G101900 Prunus persica HOM05D001151 ORTHO05D006836 2.1e-21 106.3 94 60.6
MSTRG.16311 Avicennia marina HOM05D001151 ORTHO05D006836 3.5e-21 105.5 95 60.0
TAR627G1052 Trochodendron aralioides HOM05D001151 ORTHO05D006836 3.5e-21 105.5 103 55.3
Ca_02383_v3 Cicer arietinum L. HOM05D001151 ORTHO05D006836 4.6e-21 105.1 117 50.4
Glyma.15G191800 Glycine max HOM05D001151 ORTHO05D006836 4.6e-21 105.1 115 51.3
SalBow8G1344 Salvia bowleyana HOM05D001151 ORTHO05D006836 6.0e-21 104.8 95 55.8
Oeu052707.1 Olea europaea HOM05D001151 ORTHO05D006836 7.9e-21 104.4 95 58.9
Psat7g060880 Pisum sativum HOM05D001151 ORTHO05D006836 7.9e-21 104.4 102 54.9
EL10Ac4g08227 Beta vulgaris HOM05D001151 ORTHO05D006836 1.0e-20 104.0 100 57.0
AUR62030119 Chenopodium quinoa HOM05D001151 ORTHO05D006836 1.0e-20 104.0 114 54.4
AUR62030120 Chenopodium quinoa HOM05D001151 ORTHO05D006836 1.0e-20 104.0 114 54.4
MELO3C021781.2 Cucumis melo HOM05D001151 ORTHO05D006836 1.3e-20 103.6 99 59.6
MD10G1241300 Malus domestica HOM05D001151 ORTHO05D006836 1.8e-20 103.2 100 58.0
Nn7g37742 Nelumbo nucifera HOM05D001151 ORTHO05D006836 1.8e-20 103.2 95 58.9
SalBow8G0157 Salvia bowleyana HOM05D001151 ORTHO05D006836 1.8e-20 103.2 95 54.7
Lj4g0007248 Lotus japonicus HOM05D001151 ORTHO05D006836 3.9e-20 102.1 117 50.4
VMungo0251G2869 Vigna mungo HOM05D001151 ORTHO05D006836 3.9e-20 102.1 115 50.4
Glyma.U031308 Glycine max HOM05D001151 ORTHO05D006836 5.1e-20 101.7 99 55.6
Medtr8g089300 Medicago truncatula HOM05D001151 ORTHO05D006836 5.1e-20 101.7 118 50.0
EL10Ac3g06737 Beta vulgaris HOM05D001151 ORTHO05D006836 3.3e-19 99.0 115 50.4
HanXRQChr11g0342561 Helianthus annuus HOM05D001151 ORTHO05D006836 3.3e-19 99.0 117 51.3
Sed0027287 Sechium edule HOM05D001151 ORTHO05D006836 5.7e-19 98.2 99 58.6
Haze_05971 Corylus avellana HOM05D001151 ORTHO05D006836 1.6e-18 96.7 102 55.9
Glyma.08G129300 Glycine max HOM05D001151 ORTHO05D006836 2.8e-18 95.9 93 54.8
Lj6g0010921 Lotus japonicus HOM05D001151 ORTHO05D006836 2.8e-18 95.9 95 54.7
AUR62042518 Chenopodium quinoa HOM05D001151 ORTHO05D006836 3.7e-18 95.5 93 58.1
HanXRQChr11g0342571 Helianthus annuus HOM05D001151 ORTHO05D006836 4.8e-18 95.1 117 47.9
ECA248G2052 Erigeron canadensis HOM05D001151 ORTHO05D006836 6.3e-18 94.7 98 53.1
Lsat_1_v5_gn_1_111521 Lactuca sativa HOM05D001151 ORTHO05D006836 6.3e-18 94.7 98 53.1
EL10Ac4g08352 Beta vulgaris HOM05D001151 ORTHO05D006836 1.1e-17 94.0 108 51.9
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 5.3e-17 91.7 95 56.8
Sc05g0002950 Simmondsia chinensis HOM05D001151 ORTHO05D006836 2.6e-16 89.4 95 53.7
Glyma.09G083400 Glycine max HOM05D001151 ORTHO05D006836 5.9e-16 88.2 77 59.7
MD05G1263600 Malus domestica HOM05D001151 ORTHO05D006836 1.0e-15 87.4 97 51.5
Sc05g0003220 Simmondsia chinensis HOM05D001151 ORTHO05D006836 1.0e-15 87.4 95 52.6
Migut.M01934 Erythranthe guttata HOM05D001151 ORTHO05D006836 2.9e-15 85.9 82 51.2
SGA_v2.0_scaffold223G42882 Striga asiatica HOM05D001151 ORTHO05D006836 6.5e-15 84.7 80 55.0
arahy.Tifrunner.gnm1.ann1.1BVQ2L Arachis hypogaea HOM05D001151 ORTHO05D006836 2.5e-14 82.8 79 51.9
Os12g0610800 Oryza sativa ssp. japonica HOM05D001151 ORTHO05D006836 1.6e-13 80.1 95 49.5
MBI18_g28206_MAGBIO Magnolia biondii HOM05D001151 ORTHO05D006836 1.0e-12 77.4 79 54.4
Hma1.2p1_1028F.1_g249560 Hydrangea macrophylla HOM05D001151 ORTHO05D006836 6.9e-09 64.7 51 62.7
Hma1.2p1_1485F.1_g286490 Hydrangea macrophylla HOM05D001151 ORTHO05D006836 6.9e-09 64.7 51 62.7
Gohir.D06G123800 Gossypium hirsutum HOM05D001151 ORTHO05D006836 2.2e-07 59.7 98 40.8
ATR1098G060 Amborella trichopoda HOM05D001151 ORTHO05D006836 8.5e-07 57.8 72 48.6
Zm00001eb031580 Zea mays HOM05D001151 ORTHO05D006836 1.4e-06 57.0 52 55.8
SalBow2G0349 Salvia bowleyana HOM05D001151 ORTHO05D001504 1.9e-06 56.6 97 39.2
Aqoxy1G02433 Aquilegia oxysepala HOM05D000748 ORTHO05D000394 5.5e-06 55.1 79 48.1
AUR62026363 Chenopodium quinoa HOM05D001151 ORTHO05D001504 5.5e-06 55.1 124 33.1
Aqoxy2G03101 Aquilegia oxysepala HOM05D001151 ORTHO05D001504 7.2e-06 54.7 88 37.5
BcaC06g33419 Brassica carinata HOM05D001151 ORTHO05D001504 9.4e-06 54.3 99 38.4
A03p49200 Brassica napus HOM05D001151 ORTHO05D001504 9.4e-06 54.3 99 38.4
BraA03t14019Z Brassica rapa HOM05D001151 ORTHO05D001504 9.4e-06 54.3 99 38.4


User provided reference genes

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