Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 0.0e+00 2135.1 1123 100.0
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 0.0e+00 1481.1 1144 68.6
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 0.0e+00 1478.4 1145 68.3
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 0.0e+00 1470.7 1144 68.3
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 0.0e+00 1431.0 1144 66.2
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 0.0e+00 1427.5 1145 66.4
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 0.0e+00 1424.5 1142 65.6
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 0.0e+00 1419.4 1140 66.0
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 0.0e+00 1416.7 1141 65.6
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 0.0e+00 1412.9 1142 65.7
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 0.0e+00 1407.9 1138 65.6
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 0.0e+00 1384.0 1141 66.9
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 6.8e-234 815.1 1142 41.4
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 2.0e-230 803.5 1160 41.4
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 1.7e-229 800.4 1161 41.6
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 2.3e-218 763.5 1167 39.8
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 2.0e-217 760.4 1164 39.6
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 2.6e-217 760.0 1164 39.3
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 9.8e-217 758.1 1168 39.6
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 6.6e-213 745.3 1170 40.0
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 1.6e-211 740.7 1163 39.6
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 3.4e-209 733.0 1164 39.1
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 4.1e-207 726.1 1167 37.9
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 1.0e-205 721.5 1170 37.4
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 1.2e-203 714.5 1152 37.6
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.4e-202 711.1 1165 38.3
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 6.0e-198 695.7 1197 37.0
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.3e-197 693.7 1196 36.8
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 3.3e-196 689.9 1156 37.7
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 7.3e-196 688.7 1164 38.0
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 1.3e-195 688.0 1166 38.5
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 2.1e-195 687.2 1159 37.6
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 3.4e-193 679.9 1168 38.1
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 1.3e-192 677.9 1154 39.3
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 3.2e-191 673.3 1131 37.1
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.0e-189 668.3 1159 36.8
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 5.6e-188 662.5 1158 38.6
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 3.1e-186 656.8 1166 37.0
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 1.3e-184 651.4 1147 36.8
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 3.2e-183 646.7 1164 36.6
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 1.6e-182 644.4 1159 35.4
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 3.5e-182 643.3 1179 36.1
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 3.0e-181 640.2 1166 37.1
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 2.5e-180 637.1 1145 36.1
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 7.6e-177 625.5 1168 36.7
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.0e-176 625.2 1156 37.5
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 2.1e-174 617.5 1174 35.7
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 1.3e-173 614.8 1091 36.0
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 5.1e-173 612.8 1148 37.5
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.1e-172 611.7 1138 35.2
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 1.3e-168 598.2 977 38.6
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 2.3e-165 587.4 1160 34.8
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 5.1e-165 586.3 1165 35.2
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 6.7e-165 585.9 1167 35.6
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 8.7e-165 585.5 1095 36.1
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 3.3e-164 583.6 1142 34.3
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 3.7e-163 580.1 939 39.0
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.8e-160 570.1 1176 33.5
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 3.8e-160 570.1 1166 33.0
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 8.5e-160 568.9 1259 33.5
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.2e-159 567.0 1174 33.9
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 1.6e-158 564.7 1167 32.7
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.9e-157 560.1 1164 33.1
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 8.8e-157 558.9 1168 32.4
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 8.8e-157 558.9 1168 32.4
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 9.7e-156 555.4 1161 33.2
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.4e-153 547.0 1136 32.3
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 5.9e-153 546.2 1169 33.4
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 2.9e-152 543.9 1158 33.4
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 2.7e-150 537.3 908 38.5
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 4.7e-150 536.6 1126 33.3
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 7.9e-150 535.8 997 36.0
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 5.7e-148 529.6 1166 32.2
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 7.4e-148 529.3 1045 34.4
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 2.8e-147 527.3 1157 31.5
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 6.3e-147 526.2 1172 32.5
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 8.2e-147 525.8 1162 32.4
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 9.1e-146 522.3 1096 33.9
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 8.5e-144 515.8 1161 32.6
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.9e-143 514.6 1156 32.4
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 1.6e-142 511.5 1171 32.4
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 1.6e-142 511.5 1183 32.2
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 8.0e-142 509.2 1164 32.6
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 6.8e-133 479.6 1209 30.4
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 3.7e-131 473.8 1166 31.0
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 1.2e-129 468.8 1143 31.1
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 1.3e-120 438.7 946 33.4
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 2.8e-118 431.0 1260 28.7
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 2.3e-117 427.9 1211 28.7
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 6.8e-117 426.4 1130 30.7
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 8.3e-115 419.5 982 32.1
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 1.0e-112 412.5 904 32.1
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 1.4e-109 402.1 364 61.3
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 2.6e-100 371.3 664 37.5
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 2.1e-97 361.7 1223 26.5
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 8.1e-94 349.7 892 29.6
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 3.1e-93 347.8 896 29.0
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 1.8e-72 278.9 1281 24.0
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 2.1e-70 271.9 187 71.1
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 7.1e-66 256.9 329 44.4
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 2.3e-64 251.9 306 44.4
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 1.1e-63 249.6 310 44.5
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 2.5e-63 248.4 799 28.3
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 7.4e-63 246.9 423 37.1
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 3.7e-62 244.6 310 43.5
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 8.2e-62 243.4 317 42.6
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 2.0e-60 238.8 317 42.9
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 7.6e-60 236.9 310 49.4
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 6.3e-54 217.2 1251 22.3
Oeu021362.1 Olea europaea HOM05D004959 ORTHO05D005961 2.0e-52 212.2 431 33.6
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 8.5e-51 206.8 175 54.9
CDE04G1301 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 5.1e-48 197.6 417 32.6
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 8.8e-48 196.8 304 38.5
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.1e-47 196.4 304 38.5
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 5.7e-47 194.1 246 48.0
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 1.1e-45 189.9 270 42.2
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 3.8e-43 181.4 237 41.4
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 7.2e-42 177.2 185 49.2
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 1.0e-40 173.3 177 51.4
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 5.1e-40 171.0 281 35.9
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 6.7e-40 170.6 175 51.4
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 6.7e-40 170.6 175 48.6
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 5.5e-34 151.0 168 48.8
BcaB03g11656 Brassica carinata HOM05D004959 ORTHO05D005961 7.2e-34 150.6 133 60.9
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 5.7e-31 141.0 384 26.0
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 1.7e-30 139.4 1008 21.4
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 9.4e-26 123.6 249 30.9
Phvul.005G124501 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 8.0e-25 120.6 293 29.4
Phvul.005G124551 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.8e-21 109.4 286 32.9
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 9.1e-21 107.1 131 42.7
Aqoxy5G03191 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 4.5e-20 104.8 482 25.9
Atru.chr10.384 Acer truncatum HOM05D004959 ORTHO05D005961 1.7e-19 102.8 222 30.2
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 3.8e-19 101.7 360 23.9
BcaC01g00655 Brassica carinata HOM05D004959 ORTHO05D005961 3.2e-18 98.6 128 50.0
BolC3t20554H Brassica oleracea HOM05D004959 ORTHO05D005961 4.4e-15 88.2 99 48.5
BolC3t20557H Brassica oleracea HOM05D000005 ORTHO05D000449 9.8e-15 87.0 79 60.8
C03p82750 Brassica napus HOM05D000005 ORTHO05D000449 2.2e-14 85.9 78 61.5
BcaC01g00652 Brassica carinata HOM05D004959 ORTHO05D005961 3.7e-14 85.1 47 83.0
C03p82730 Brassica napus HOM05D004959 ORTHO05D005961 3.7e-14 85.1 98 49.0
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.8e-13 82.8 111 41.4
CDE04G2317 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 3.1e-13 82.0 430 22.8
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 7.0e-13 80.9 116 40.5
Aqoxy5G03189 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.3e-10 72.0 268 25.7
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.2e-09 70.1 97 41.2
BolC3t20556H Brassica oleracea HOM05D050026 ORTHO05D041081 2.8e-09 68.9 341 24.3
C03p82740 Brassica napus HOM05D050026 ORTHO05D041081 3.6e-09 68.6 338 24.6
TPR.G940 Trifolium pratense HOM05D004959 ORTHO05D005961 1.8e-08 66.2 98 39.8


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