Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.9e-46 188.7 89 100.0
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 5.3e-33 144.1 111 64.9
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.6e-32 142.5 111 64.0
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 1.0e-31 139.8 111 63.1
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 5.0e-31 137.5 111 60.4
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 5.0e-31 137.5 111 60.4
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 8.5e-31 136.7 111 61.3
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 5.5e-30 134.0 111 59.5
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 9.4e-30 133.3 111 60.4
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 1.2e-29 132.9 111 58.6
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 4.7e-29 131.0 111 58.6
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 1.0e-28 129.8 111 58.6
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 4.0e-28 127.9 111 58.6
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 7.5e-27 123.6 112 57.1
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 2.8e-26 121.7 114 52.6
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 4.1e-25 117.9 109 52.3
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 1.2e-24 116.3 111 50.5
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 2.0e-24 115.5 110 52.7
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 3.5e-24 114.8 110 51.8
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.5e-24 114.4 111 49.5
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 7.7e-24 113.6 111 49.5
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 7.7e-24 113.6 111 48.6
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.0e-23 113.2 109 51.4
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.3e-23 112.8 109 51.4
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.3e-23 112.8 109 51.4
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.3e-23 112.8 109 51.4
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 6.5e-23 110.5 110 50.0
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 6.5e-23 110.5 111 50.5
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 8.5e-23 110.2 110 48.2
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 1.5e-22 109.4 111 46.8
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.5e-22 109.4 110 50.0
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.5e-22 109.4 110 48.2
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 1.9e-22 109.0 110 50.0
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 1.9e-22 109.0 110 48.2
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.2e-22 108.2 110 50.0
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 3.2e-22 108.2 109 50.5
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.2e-22 108.2 106 49.1
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 4.2e-22 107.8 110 47.3
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 7.2e-22 107.1 111 46.8
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 9.4e-22 106.7 111 47.7
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 9.4e-22 106.7 110 47.3
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 9.4e-22 106.7 110 48.2
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 9.4e-22 106.7 110 48.2
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 9.4e-22 106.7 110 46.4
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.2e-21 106.3 110 49.1
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.2e-21 106.3 110 48.2
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.2e-21 106.3 110 48.2
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 1.2e-21 106.3 110 49.1
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 1.6e-21 105.9 110 47.3
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 3.6e-21 104.8 111 46.8
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 4.7e-21 104.4 110 47.3
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 6.1e-21 104.0 110 46.4
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 6.1e-21 104.0 106 48.1
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 8.0e-21 103.6 110 48.2
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 1.0e-20 103.2 110 44.5
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 1.0e-20 103.2 105 48.6
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 1.8e-20 102.4 106 47.2
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 1.8e-20 102.4 111 44.1
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 1.8e-20 102.4 111 45.9
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 2.3e-20 102.1 106 46.2
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 2.3e-20 102.1 110 46.4
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 2.3e-20 102.1 112 47.3
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 2.3e-20 102.1 111 45.9
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 2.3e-20 102.1 111 45.9
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 3.0e-20 101.7 110 46.4
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 3.0e-20 101.7 111 45.0
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 3.0e-20 101.7 109 45.9
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 4.0e-20 101.3 111 45.9
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.0e-20 101.3 110 45.5
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 5.2e-20 100.9 110 45.5
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 5.2e-20 100.9 110 45.5
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 6.8e-20 100.5 106 46.2
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 6.8e-20 100.5 111 45.0
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 1.5e-19 99.4 108 43.5
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 2.0e-19 99.0 111 45.9
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 2.6e-19 98.6 113 45.1
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 2.6e-19 98.6 111 45.0
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 3.4e-19 98.2 111 43.2
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 3.4e-19 98.2 106 45.3
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 4.4e-19 97.8 108 42.6
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 7.5e-19 97.1 105 46.7
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 7.5e-19 97.1 111 45.0
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 2.2e-18 95.5 109 45.0
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 2.2e-18 95.5 110 45.5
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 2.8e-18 95.1 110 41.8
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 2.8e-18 95.1 105 46.7
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.8e-18 95.1 110 44.5
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 3.7e-18 94.7 96 49.0
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 6.3e-18 94.0 111 45.0
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 6.3e-18 94.0 101 48.5
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 6.3e-18 94.0 101 48.5
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 6.3e-18 94.0 111 45.0
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 8.3e-18 93.6 100 49.0
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 1.1e-17 93.2 104 45.2
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 1.4e-17 92.8 110 44.5
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 1.8e-17 92.4 104 45.2
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 4.1e-17 91.3 111 42.3
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 4.1e-17 91.3 101 46.5
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 9.1e-17 90.1 111 43.2
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 1.6e-16 89.4 101 43.6
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 2.0e-16 89.0 106 43.4
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 2.0e-16 89.0 106 42.5
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 2.0e-16 89.0 101 44.6
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 5.9e-16 87.4 101 43.6
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 5.9e-16 87.4 115 39.1
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 5.9e-16 87.4 107 40.2
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.7e-15 85.9 101 43.6
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.7e-15 85.9 115 37.4
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 3.8e-15 84.7 109 39.4
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 8.6e-15 83.6 74 56.8
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 1.1e-14 83.2 110 38.2
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 1.5e-14 82.8 111 40.5
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 2.5e-14 82.0 116 37.9
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 3.3e-14 81.6 97 43.3
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 5.5e-14 80.9 96 40.6
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 1.7e-10 69.3 95 37.9
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.4e-09 65.5 50 56.0
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 2.4e-09 65.5 68 48.5
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 7.0e-09 63.9 51 54.9
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 2.7e-08 62.0 97 39.2
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.7e-08 62.0 88 42.0
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.7e-07 59.3 51 51.0
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.9e-07 58.2 51 51.0


User provided reference genes

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