Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G1670 Aethionema arabicum HOM05D000066 ORTHO05D059040 1.4e-65 252.7 120 100.0
Aa31LG6G1690 Aethionema arabicum HOM05D000066 ORTHO05D001011 3.8e-18 95.1 150 45.3
C01p13030 Brassica napus HOM05D000066 ORTHO05D001011 3.1e-12 75.5 161 35.4
BraA01t01048Z Brassica rapa HOM05D000066 ORTHO05D001011 5.4e-12 74.7 160 35.0
AT4G18990 Arabidopsis thaliana HOM05D000066 ORTHO05D001011 9.1e-12 73.9 149 35.6
Sp7g17710 Schrenkiella parvula HOM05D000066 ORTHO05D001011 9.1e-12 73.9 149 39.6
A03p51680 Brassica napus HOM05D000066 ORTHO05D001011 1.2e-11 73.6 148 39.9
BolC1t01278H Brassica oleracea HOM05D000066 ORTHO05D001011 1.2e-11 73.6 161 34.8
BraA03t14257Z Brassica rapa HOM05D000066 ORTHO05D001011 1.2e-11 73.6 148 39.2
CARHR225860 Cardamine hirsuta HOM05D000066 ORTHO05D001011 1.2e-11 73.6 152 34.9
Carub.0007s2218 Capsella rubella HOM05D000066 ORTHO05D001011 1.6e-11 73.2 162 34.6
A01p11010 Brassica napus HOM05D000066 ORTHO05D001011 2.0e-11 72.8 160 34.4
BcaNung06621 Brassica carinata HOM05D000066 ORTHO05D001011 3.5e-11 72.0 148 39.2
C07p50180 Brassica napus HOM05D000066 ORTHO05D001011 4.5e-11 71.6 148 39.2
BolC7t45521H Brassica oleracea HOM05D000066 ORTHO05D001011 4.5e-11 71.6 148 39.2
AL7G35170 Arabidopsis lyrata HOM05D000066 ORTHO05D001011 5.9e-11 71.2 149 35.6
Thhalv10027323m.g Eutrema salsugineum HOM05D000066 ORTHO05D001011 1.5e-09 66.6 160 33.1
PGR042G2736 Punica granatum HOM05D000066 ORTHO05D001011 4.7e-08 61.6 146 32.9
Eucgr.E00225 Eucalyptus grandis HOM05D000066 ORTHO05D001011 6.1e-08 61.2 143 32.2
Prupe.5G027800 Prunus persica HOM05D000066 ORTHO05D001011 1.4e-07 60.1 148 31.1
Manes.15G192300 Manihot esculenta HOM05D000066 ORTHO05D001011 2.3e-07 59.3 156 30.8
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 4.0e-07 58.5 108 44.4
Sed0015752 Sechium edule HOM05D000066 ORTHO05D001011 4.0e-07 58.5 144 30.6
ClCG09G011620 Citrullus lanatus HOM05D000066 ORTHO05D001011 5.2e-07 58.2 148 30.4
QL12p001766 Quercus lobata HOM05D000066 ORTHO05D001011 5.2e-07 58.2 144 29.9
RcHm_v2.0_Chr7g0212101 Rosa chinensis HOM05D000066 ORTHO05D001011 5.2e-07 58.2 146 30.8
Sabra03G0065800 Salix brachista HOM05D000066 ORTHO05D001011 5.2e-07 58.2 153 31.4
Cfa012502 Carpinus fangiana HOM05D000066 ORTHO05D001011 8.9e-07 57.4 142 32.4
MELO3C003441.2 Cucumis melo HOM05D000066 ORTHO05D001011 8.9e-07 57.4 148 29.7
TWI15G1226 Tripterygium wilfordii HOM05D000066 ORTHO05D001011 1.2e-06 57.0 141 30.5
Aa31LG2G13840 Aethionema arabicum HOM05D000066 ORTHO05D001011 1.5e-06 56.6 140 31.4
BcaNung04024 Brassica carinata HOM05D000066 ORTHO05D001011 1.5e-06 56.6 134 37.3
CsaV3_3G048830 Cucumis sativus L. HOM05D000066 ORTHO05D001011 1.5e-06 56.6 148 29.1
Glyma.01G013900 Glycine max HOM05D000066 ORTHO05D001011 2.0e-06 56.2 144 30.6
MD16G1278900 Malus domestica HOM05D000066 ORTHO05D001011 2.0e-06 56.2 148 29.7
Psat2g139120 Pisum sativum HOM05D000066 ORTHO05D001011 2.0e-06 56.2 147 29.9
CiPaw.11G098800 Carya illinoinensis HOM05D000066 ORTHO05D001011 2.6e-06 55.8 142 28.9
Haze_08167 Corylus avellana HOM05D000066 ORTHO05D001011 2.6e-06 55.8 142 31.7
Duzib084G0197 Durio zibethinus HOM05D000066 ORTHO05D001011 2.6e-06 55.8 141 32.6
Lalb_Chr09g0325451 Lupinus albus HOM05D000066 ORTHO05D001011 2.6e-06 55.8 142 30.3
MD06G1027300 Malus domestica HOM05D000066 ORTHO05D001011 2.6e-06 55.8 144 30.6
Potri.001G136100 Populus trichocarpa HOM05D000066 ORTHO05D001011 2.6e-06 55.8 148 30.4
Eucgr.D02229 Eucalyptus grandis HOM05D000066 ORTHO05D001011 3.4e-06 55.5 143 30.8
BraA05t21398Z Brassica rapa HOM05D000066 ORTHO05D001011 4.4e-06 55.1 142 31.0
Ca_25169_v3 Cicer arietinum L. HOM05D000066 ORTHO05D001011 4.4e-06 55.1 151 27.2
Ca_29685_v3 Cicer arietinum L. HOM05D000066 ORTHO05D001011 4.4e-06 55.1 151 27.2
SHI20235 Sapria himalayana HOM05D000066 ORTHO05D001011 4.4e-06 55.1 142 32.4
GSVIVG01013055001 Vitis vinifera HOM05D000066 ORTHO05D001011 4.4e-06 55.1 143 30.1
BcaC05g27920 Brassica carinata HOM05D000066 ORTHO05D001011 5.7e-06 54.7 142 31.0
C05p39260 Brassica napus HOM05D000066 ORTHO05D001011 5.7e-06 54.7 142 31.0
BolC5t32662H Brassica oleracea HOM05D000066 ORTHO05D001011 5.7e-06 54.7 142 31.0
Glyma.09G208300 Glycine max HOM05D000066 ORTHO05D001011 5.7e-06 54.7 144 28.5
Potri.003G097300 Populus trichocarpa HOM05D000066 ORTHO05D001011 5.7e-06 54.7 154 29.9
PGR031G1513 Punica granatum HOM05D000066 ORTHO05D001011 5.7e-06 54.7 146 28.8
PGR031G1749 Punica granatum HOM05D000066 ORTHO05D001011 5.7e-06 54.7 146 28.8
arahy.Tifrunner.gnm1.ann1.P4K14L Arachis hypogaea HOM05D000066 ORTHO05D001011 7.5e-06 54.3 134 29.1
arahy.Tifrunner.gnm1.ann1.UCU3UG Arachis hypogaea HOM05D000066 ORTHO05D001011 7.5e-06 54.3 134 29.1
BcaB04g17997 Brassica carinata HOM05D000066 ORTHO05D001011 7.5e-06 54.3 142 31.0
Cpa.g.sc208.1 Carica papaya HOM05D000066 ORTHO05D001011 7.5e-06 54.3 162 30.2
Thhalv10008109m.g Eutrema salsugineum HOM05D000066 ORTHO05D001011 7.5e-06 54.3 142 31.0
Lj2g0000617 Lotus japonicus HOM05D000066 ORTHO05D001011 7.5e-06 54.3 143 29.4
Sp1g27830 Schrenkiella parvula HOM05D000066 ORTHO05D001011 7.5e-06 54.3 142 31.0
VMungo1215G0119 Vigna mungo HOM05D000066 ORTHO05D001011 7.5e-06 54.3 144 29.9
Manes.17G015100 Manihot esculenta HOM05D000066 ORTHO05D001011 9.8e-06 53.9 138 31.2
Phvul.002G136200 Phaseolus vulgaris HOM05D000066 ORTHO05D001011 9.8e-06 53.9 144 29.9
TAR636G1854 Trochodendron aralioides HOM05D000066 ORTHO05D001011 9.8e-06 53.9 137 30.7


User provided reference genes

Program Settings