Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 3.9e-66 254.6 124 100.0
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.7e-61 239.2 124 93.5
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 1.6e-59 232.6 124 89.5
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 5.1e-58 227.6 124 86.3
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.9e-52 209.1 125 79.2
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.9e-52 209.1 125 79.2
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.9e-52 209.1 124 81.5
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 79.2
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 79.2
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.2e-52 208.0 125 78.4
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 7.2e-52 207.2 124 75.8
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 75.8
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 75.8
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 75.8
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.1e-51 205.7 124 75.8
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.1e-51 205.7 124 75.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 2.1e-51 205.7 125 76.8
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 77.6
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 78.4
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.5e-51 204.9 125 78.4
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.5e-51 204.9 125 76.0
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 78.4
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 78.4
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 7.9e-51 203.8 125 76.0
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 7.9e-51 203.8 124 75.0
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 76.0
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.0e-50 203.4 124 74.2
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 73.6
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 75.2
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 2.3e-50 202.2 124 78.2
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 2.3e-50 202.2 124 78.2
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 73.6
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 3.9e-50 201.4 125 75.2
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.9e-50 201.4 125 76.8
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 3.9e-50 201.4 125 76.0
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 5.1e-50 201.1 125 80.0
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 5.1e-50 201.1 125 74.4
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 5.1e-50 201.1 125 75.2
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 5.1e-50 201.1 125 75.2
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 5.1e-50 201.1 124 72.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 8.7e-50 200.3 125 74.4
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.1e-49 199.9 124 78.2
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.1e-49 199.9 124 73.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-49 199.9 124 73.4
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.1e-49 199.9 124 75.8
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.1e-49 199.9 124 75.8
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 2.5e-49 198.7 125 76.8
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 72.8
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 75.2
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 4.3e-49 198.0 124 75.0
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 4.3e-49 198.0 124 75.0
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 4.3e-49 198.0 125 72.8
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 4.3e-49 198.0 124 75.8
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 5.7e-49 197.6 125 74.4
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 9.7e-49 196.8 124 73.4
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 9.7e-49 196.8 124 74.2
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 9.7e-49 196.8 125 74.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.2e-48 195.7 124 71.8
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 2.2e-48 195.7 124 71.8
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.8e-48 195.3 124 75.0
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 3.7e-48 194.9 124 78.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.7e-48 194.9 125 73.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.7e-48 194.9 125 74.4
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 3.7e-48 194.9 125 72.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 4.8e-48 194.5 124 74.2
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 1.1e-47 193.4 125 71.2
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.1e-47 193.4 124 72.6
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 1.1e-47 193.4 124 69.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.8e-47 192.6 137 70.1
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 1.8e-47 192.6 124 71.0
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.4e-47 192.2 125 71.2
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 3.1e-47 191.8 125 71.2
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 5.3e-47 191.0 120 79.2
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 72.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 68.8
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 2.6e-46 188.7 124 75.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.4e-46 188.3 125 72.8
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 4.5e-46 188.0 125 72.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 4.5e-46 188.0 125 74.4
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 7.7e-46 187.2 124 68.5
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 7.7e-46 187.2 125 72.0
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 1.7e-45 186.0 149 61.7
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.2e-45 185.7 125 68.8
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 2.2e-45 185.7 125 68.8
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 2.9e-45 185.3 125 68.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 2.9e-45 185.3 125 68.8
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.8e-45 184.9 125 70.4
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 5.0e-45 184.5 125 71.2
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 5.0e-45 184.5 171 55.6
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 6.5e-45 184.1 132 66.7
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 70.4
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 5.5e-44 181.0 125 71.2
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 70.4
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 3.6e-43 178.3 108 74.1
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.0e-42 176.8 125 67.2
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.1e-41 173.3 102 79.4
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 4.3e-41 171.4 204 47.5
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 7.4e-41 170.6 125 64.0
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.2e-40 167.2 102 79.4
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.4e-39 165.6 122 63.1
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 2.4e-39 165.6 125 64.0
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 6.9e-39 164.1 123 63.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 6.9e-39 164.1 123 63.4
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.5e-38 161.4 102 76.5
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.9e-38 161.0 102 76.5
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 7.7e-38 160.6 125 64.0
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 1.3e-37 159.8 125 61.6
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.8e-37 158.3 124 62.9
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.9e-36 156.0 125 63.2
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 5.7e-33 144.4 121 61.2
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 7.0e-31 137.5 113 56.6
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 2.0e-30 136.0 80 77.5
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.3e-29 133.3 80 77.5
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 3.8e-29 131.7 80 73.8
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 3.8e-29 131.7 80 73.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 5.5e-28 127.9 77 77.9
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 5.5e-28 127.9 77 77.9
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 7.2e-20 100.9 105 52.4
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 1.6e-19 99.8 64 75.0
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 5.7e-17 91.3 58 69.0
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 5.7e-17 91.3 58 69.0
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 7.5e-17 90.9 77 58.4
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.1e-15 84.0 53 69.8
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.0e-14 82.8 67 61.2
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 2.7e-14 82.4 58 65.5
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 6.8e-10 67.8 45 73.3
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 2.0e-09 66.2 44 68.2
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 1.3e-08 63.5 44 72.7


User provided reference genes

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