Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 2.6e-161 572.0 289 100.0
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 2.3e-117 426.0 228 95.6
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 1.9e-116 422.9 228 94.3
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.9e-116 422.9 228 94.3
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 1.8e-114 416.4 223 94.2
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 4.0e-114 415.2 228 91.2
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 9.0e-114 414.1 223 93.7
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.5e-113 413.3 221 94.6
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.0e-109 400.6 228 88.2
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 1.5e-108 396.7 226 87.2
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 4.3e-108 395.2 228 86.4
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 4.3e-108 395.2 228 86.4
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 5.6e-108 394.8 226 86.7
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.6e-107 393.3 228 86.4
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 1.6e-107 393.3 226 85.8
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.6e-107 393.3 226 86.7
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 2.8e-107 392.5 228 86.4
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 6.2e-107 391.3 228 84.6
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 8.1e-107 391.0 224 87.5
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 1.4e-106 390.2 221 86.4
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 6.9e-106 387.9 227 87.2
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-105 385.6 224 87.1
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 7.6e-105 384.4 224 87.1
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 1.7e-104 383.3 224 86.6
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.9e-103 379.8 205 93.7
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 3.5e-102 375.6 204 92.6
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 3.3e-100 369.0 228 79.8
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 3.3e-100 369.0 228 80.3
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 5.6e-100 368.2 206 88.3
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 3.7e-99 365.5 228 79.4
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 8.2e-99 364.4 228 78.5
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 1.4e-98 363.6 228 77.6
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 1.2e-97 360.5 209 87.1
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 1.2e-97 360.5 209 87.1
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 1.2e-97 360.5 228 78.9
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 1.5e-97 360.1 228 75.9
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.5e-97 360.1 228 77.6
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 7.6e-97 357.8 226 77.0
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 2.2e-96 356.3 224 79.5
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 2.2e-96 356.3 226 78.3
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 2.2e-96 356.3 226 76.5
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 1.1e-95 354.0 204 86.3
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 1.1e-95 354.0 226 76.1
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 3.2e-95 352.4 223 77.6
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 3.2e-95 352.4 226 76.5
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 9.3e-95 350.9 228 75.4
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.2e-94 350.5 223 77.1
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 1.2e-94 350.5 226 76.5
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 1.6e-94 350.1 226 74.8
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 2.1e-94 349.7 222 76.6
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 2.7e-94 349.4 228 74.6
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 3.5e-94 349.0 226 75.7
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 4.6e-94 348.6 221 76.0
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 6.0e-94 348.2 223 77.1
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 7.9e-94 347.8 224 75.4
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.8e-93 346.7 221 75.6
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 3.0e-93 345.9 223 74.4
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 3.0e-93 345.9 224 75.0
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 5.1e-93 345.1 224 76.3
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 5.1e-93 345.1 221 75.1
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 5.1e-93 345.1 228 72.8
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.5e-92 342.8 221 74.7
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 3.3e-92 342.4 226 72.1
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 3.3e-92 342.4 226 72.1
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 3.3e-92 342.4 226 71.7
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 4.3e-92 342.0 223 74.0
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 5.7e-92 341.7 226 71.7
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 1.6e-91 340.1 219 77.2
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 2.8e-91 339.3 221 75.6
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 4.8e-91 338.6 221 75.1
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 4.8e-91 338.6 220 75.5
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 8.2e-91 337.8 219 75.3
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 8.2e-91 337.8 218 76.1
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 8.2e-91 337.8 225 75.1
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 8.2e-91 337.8 225 75.1
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 9.0e-90 334.3 222 73.9
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.5e-89 333.6 221 74.7
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 1.5e-89 333.6 228 73.7
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 2.0e-89 333.2 219 74.9
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 2.6e-89 332.8 223 74.4
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 2.6e-89 332.8 227 73.6
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 5.9e-89 331.6 219 74.4
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 1.0e-88 330.9 222 73.9
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 1.7e-88 330.1 237 69.6
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 2.2e-88 329.7 220 73.2
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 6.5e-88 328.2 228 71.1
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 1.1e-87 327.4 220 73.2
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.1e-87 327.4 219 72.1
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 1.4e-87 327.0 219 73.5
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 1.9e-87 326.6 220 72.7
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 2.5e-87 326.2 227 71.8
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 2.5e-87 326.2 219 71.2
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 3.2e-87 325.9 227 69.6
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 4.2e-87 325.5 219 72.6
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 7.2e-87 324.7 217 72.4
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 2.1e-86 323.2 226 69.0
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 3.6e-86 322.4 230 70.0
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 4.6e-86 322.0 228 70.6
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 7.9e-86 321.2 228 70.2
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 3.9e-85 318.9 217 71.0
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 5.1e-85 318.5 217 71.4
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 6.7e-85 318.2 202 76.7
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 6.7e-85 318.2 221 71.5
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 6.7e-85 318.2 221 71.5
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 8.8e-85 317.8 204 74.0
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.5e-84 317.0 235 66.8
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 1.5e-84 317.0 210 72.4
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 2.0e-84 316.6 215 72.6
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 3.3e-84 315.8 204 76.0
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 5.7e-84 315.1 222 69.8
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 2.2e-83 313.2 210 70.0
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 4.8e-83 312.0 277 61.7
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.8e-83 312.0 221 69.2
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 6.3e-83 311.6 266 62.8
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 1.1e-82 310.8 210 71.4
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 1.4e-82 310.5 204 72.5
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 2.4e-82 309.7 224 69.2
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 5.9e-81 305.1 203 72.4
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 1.0e-80 304.3 206 80.1
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.2e-80 303.1 280 58.2
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 5.0e-80 302.0 204 73.0
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 7.2e-79 298.1 206 71.4
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 2.1e-78 296.6 221 66.1
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 2.3e-77 293.1 202 71.8
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 6.7e-77 291.6 243 61.3
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 3.7e-75 285.8 159 92.5
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 3.7e-75 285.8 212 67.5
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 4.8e-75 285.4 212 66.0
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 2.4e-74 283.1 198 70.7
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 2.0e-73 280.0 202 67.8
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 1.0e-72 277.7 213 67.1
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 1.7e-72 276.9 216 63.9
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 2.9e-72 276.2 186 73.1
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.2e-70 270.8 228 64.5
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 2.7e-70 269.6 208 68.8
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 3.6e-70 269.2 229 63.8
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 6.7e-69 265.0 175 74.3
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 1.1e-68 264.2 223 61.0
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 4.1e-66 255.8 224 59.4
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.1e-63 247.7 152 84.9
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 7.2e-63 245.0 160 78.1
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 2.7e-62 243.0 219 57.5
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.8e-61 240.4 230 57.8
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 3.0e-61 239.6 159 74.8
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 1.2e-60 237.7 152 78.9
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 9.7e-60 234.6 214 58.4
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 9.7e-60 234.6 180 66.7
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 3.1e-58 229.6 226 55.3
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 2.7e-57 226.5 225 58.2
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 7.7e-57 224.9 211 56.9
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 1.3e-56 224.2 211 56.9
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 1.5e-55 220.7 227 52.9
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.0e-53 214.5 185 63.2
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 6.3e-51 205.3 221 52.0
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 9.1e-50 201.4 211 49.8
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 1.1e-47 194.5 105 93.3
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 5.5e-47 192.2 128 80.5
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.4e-45 187.6 188 60.6
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 5.9e-41 172.2 237 45.1
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 6.1e-38 162.2 119 75.6
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 2.2e-35 153.7 111 66.7
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 2.9e-35 153.3 217 43.3
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 1.4e-34 151.0 99 75.8
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.4e-34 151.0 225 42.2
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 1.9e-34 150.6 237 40.1
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.0e-28 130.6 123 57.7
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 7.8e-25 118.6 157 42.0
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 1.7e-24 117.5 78 74.4
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 1.7e-19 100.9 72 62.5
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 1.6e-17 94.4 76 60.5
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 8.1e-14 82.0 205 30.7
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 2.4e-13 80.5 73 56.2
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 8.9e-13 78.6 105 47.6
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 2.3e-08 63.9 40 67.5
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 2.8e-06 57.0 69 52.2


User provided reference genes

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