Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G16100 Aethionema arabicum HOM05D003739 ORTHO05D003996 4.6e-248 860.9 484 100.0
AL7G11100 Arabidopsis lyrata HOM05D003739 ORTHO05D003996 1.2e-113 414.5 507 54.6
AT4G39160 Arabidopsis thaliana HOM05D003739 ORTHO05D003996 1.4e-111 407.5 507 55.8
BcaB03g12246 Brassica carinata HOM05D003739 ORTHO05D003996 9.5e-100 368.2 507 51.3
Carub.0007s0104 Capsella rubella HOM05D003739 ORTHO05D003996 4.0e-98 362.8 499 50.1
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 3.4e-97 359.8 400 56.0
Sp3g07810 Schrenkiella parvula HOM05D003739 ORTHO05D000043 9.2e-95 351.7 433 54.3
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 2.7e-94 350.1 520 51.7
CARHR247590 Cardamine hirsuta HOM05D003739 ORTHO05D003996 2.7e-94 350.1 507 51.1
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 5.9e-94 349.0 516 52.1
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 1.4e-90 337.8 511 50.9
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 1.4e-90 337.8 517 49.5
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 2.3e-85 320.5 518 47.9
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 4.7e-83 312.8 499 46.7
C09p07090 Brassica napus HOM05D003739 ORTHO05D003996 8.0e-83 312.0 505 46.9
BolC7t46745H Brassica oleracea HOM05D003739 ORTHO05D003996 1.5e-81 307.8 489 46.0
BolC9t53626H Brassica oleracea HOM05D003739 ORTHO05D003996 2.9e-80 303.5 508 46.3
BcaC04g23559 Brassica carinata HOM05D003739 ORTHO05D003996 3.7e-80 303.1 508 46.9
THA.LOC104800691 Tarenaya hassleriana HOM05D003739 ORTHO05D003996 8.3e-80 302.0 515 41.7
BraA06t27734Z Brassica rapa HOM05D003739 ORTHO05D003996 1.3e-77 294.7 491 44.4
A06p48670 Brassica napus HOM05D003739 ORTHO05D003996 1.6e-75 287.7 506 43.3
A09p06800 Brassica napus HOM05D003739 ORTHO05D003996 4.9e-72 276.2 516 45.5
BraA09t36326Z Brassica rapa HOM05D003739 ORTHO05D003996 5.4e-71 272.7 513 45.2
C07p63340 Brassica napus HOM05D003739 ORTHO05D003996 1.9e-68 264.2 495 40.2
CARHR106820 Cardamine hirsuta HOM05D003739 ORTHO05D003996 5.6e-68 262.7 363 53.2
Aa31LG7G15010 Aethionema arabicum HOM05D003739 ORTHO05D003996 2.7e-54 217.2 301 49.2
Sp5g17020 Schrenkiella parvula HOM05D003739 ORTHO05D003996 7.8e-54 215.7 309 50.2
BcaNung02353 Brassica carinata HOM05D003739 ORTHO05D003996 1.9e-47 194.5 232 53.0
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 1.8e-37 161.4 286 39.5
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 1.8e-37 161.4 312 39.1
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 3.9e-37 160.2 282 39.7
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 2.5e-36 157.5 299 38.8
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 7.4e-36 156.0 281 40.6
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 1.3e-35 155.2 323 37.5
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 1.6e-35 154.8 279 38.4
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 2.1e-35 154.5 465 30.8
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 2.1e-35 154.5 198 47.0
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 2.1e-35 154.5 366 34.4
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 2.1e-35 154.5 352 35.8
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 2.8e-35 154.1 345 36.2
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 2.8e-35 154.1 324 37.3
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 4.8e-35 153.3 374 35.6
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 4.8e-35 153.3 255 39.6
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 4.8e-35 153.3 343 36.4
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 6.2e-35 152.9 279 39.4
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 8.2e-35 152.5 202 45.5
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 3.1e-34 150.6 278 39.9
PSO541G6540 Papaver somniferum HOM05D003739 ORTHO05D003996 6.9e-34 149.4 261 37.2
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 2.0e-33 147.9 236 40.7
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 2.6e-33 147.5 482 30.1
Sed0001527 Sechium edule HOM05D003739 ORTHO05D003996 5.8e-33 146.4 317 35.6
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 1.0e-32 145.6 427 31.1
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 2.9e-32 144.1 333 35.1
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 2.9e-32 144.1 373 33.5
PSO675G5166 Papaver somniferum HOM05D003739 ORTHO05D003996 3.8e-32 143.7 339 34.2
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 4.9e-32 143.3 367 34.3
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 8.4e-32 142.5 182 44.0
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.1e-31 142.1 372 34.1
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 1.1e-31 142.1 284 38.4
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 1.4e-31 141.7 334 33.8
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 1.4e-31 141.7 247 38.5
CsaV3_5G020720 Cucumis sativus L. HOM05D003739 ORTHO05D003996 2.5e-31 141.0 313 35.8
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 2.5e-31 141.0 311 37.0
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 3.2e-31 140.6 454 32.4
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 4.2e-31 140.2 331 32.6
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 4.2e-31 140.2 378 33.6
CDE06G1699 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 1.6e-30 138.3 263 38.4
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 2.1e-30 137.9 276 38.0
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 4.6e-30 136.7 370 34.3
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 7.9e-30 136.0 255 36.5
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 1.0e-29 135.6 454 31.7
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 2.3e-29 134.4 194 42.8
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 2.3e-29 134.4 506 26.1
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 3.0e-29 134.0 321 34.0
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 5.1e-29 133.3 197 42.1
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 6.7e-29 132.9 297 35.4
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 8.7e-29 132.5 375 33.1
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 8.7e-29 132.5 174 46.6
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 1.5e-28 131.7 236 37.7
ATR0564G411 Amborella trichopoda HOM05D003739 ORTHO05D003996 2.5e-28 131.0 226 37.2
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.5e-28 131.0 275 38.2
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 4.3e-28 130.2 257 37.7
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 5.7e-28 129.8 455 31.2
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 9.7e-28 129.0 322 33.5
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 2.2e-27 127.9 275 36.7
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 4.8e-27 126.7 286 36.0
FAN24G2517 Fragaria x ananassa HOM05D003739 ORTHO05D003996 8.2e-27 125.9 320 35.6
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 8.2e-27 125.9 278 35.3
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.1e-26 125.6 337 34.7
HanXRQChr10g0289001 Helianthus annuus HOM05D003739 ORTHO05D003996 1.4e-26 125.2 270 35.6
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 1.8e-26 124.8 328 34.8
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 3.1e-26 124.0 173 45.7
HPP92_028201 Vanilla planifolia HOM05D003739 ORTHO05D003996 3.1e-26 124.0 242 35.1
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 5.3e-26 123.2 249 38.6
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 6.9e-26 122.9 278 34.2
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 2.6e-25 120.9 435 28.5
FvH4_2g09520 Fragaria vesca HOM05D003739 ORTHO05D003996 3.4e-25 120.6 355 33.8
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 3.4e-25 120.6 474 27.0
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 3.4e-25 120.6 301 35.9
Hund09716 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.3e-24 118.6 204 41.7
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 1.7e-24 118.2 262 33.2
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 2.2e-24 117.9 204 38.2
SalBow6G4317 Salvia bowleyana HOM05D003739 ORTHO05D003996 3.8e-24 117.1 189 40.7
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 5.0e-24 116.7 105 52.4
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 5.0e-24 116.7 336 33.3
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 1.1e-23 115.5 338 30.2
Glyma.01G228200 Glycine max HOM05D003739 ORTHO05D003996 1.1e-23 115.5 382 30.4
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 4.2e-23 113.6 379 30.6
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 5.5e-23 113.2 320 35.3
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 5.5e-23 113.2 275 32.0
CARHR112440 Cardamine hirsuta HOM05D003739 ORTHO05D003996 2.1e-22 111.3 62 88.7
Dinv05659 Davidia involucrata HOM05D003739 ORTHO05D003996 1.0e-21 109.0 169 43.2
Cpa.g.sc14.123 Carica papaya HOM05D003739 ORTHO05D003996 1.4e-21 108.6 515 28.3
Dinv13445 Davidia involucrata HOM05D003739 ORTHO05D003996 8.8e-21 105.9 175 36.0
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 8.8e-21 105.9 440 27.3
SEGI_13436 Sequoiadendron giganteum HOM05D003739 ORTHO05D003996 8.8e-21 105.9 97 50.5
BcaNung02354 Brassica carinata HOM05D003739 ORTHO05D003996 1.5e-20 105.1 248 39.1
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 5.7e-20 103.2 315 32.4
FvH4_2g03400 Fragaria vesca HOM05D003739 ORTHO05D003996 2.8e-19 100.9 274 32.1
Zm00001eb261130 Zea mays HOM05D025681 ORTHO05D003996 1.1e-18 99.0 243 34.2
Gohir.A09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 3.1e-18 97.4 302 33.1
Medtr8g091850 Medicago truncatula HOM05D003739 ORTHO05D003996 3.1e-18 97.4 164 40.9
DCAR_004344 Daucus carota HOM05D003739 ORTHO05D003996 2.6e-17 94.4 281 29.5
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 3.4e-17 94.0 476 27.9
Zm00001eb249730 Zea mays HOM05D025681 ORTHO05D003996 7.7e-17 92.8 166 35.5
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 8.5e-16 89.4 174 37.9
CARHR106830 Cardamine hirsuta HOM05D003739 ORTHO05D003996 5.5e-15 86.7 77 63.6
Mapoly0023s0090 Marchantia polymorpha HOM05D003739 ORTHO05D003996 4.7e-14 83.6 133 33.1
Psat7g051160 Pisum sativum HOM05D003739 ORTHO05D003996 4.7e-14 83.6 256 30.1
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 6.1e-14 83.2 388 28.9
Pp3c18_8710 Physcomitrium patens HOM05D003739 ORTHO05D003996 1.4e-13 82.0 139 35.3
FAN24G0708 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.5e-12 78.6 256 30.5
CBR_g31667 Chara braunii HOM05D003739 ORTHO05D003996 4.4e-12 77.0 88 43.2
Pp3c21_11880 Physcomitrium patens HOM05D003739 ORTHO05D003996 4.4e-12 77.0 97 39.2
Dinv07186 Davidia involucrata HOM05D000053 ORTHO05D045112 3.7e-11 73.9 89 39.3
FAN27G3438 Fragaria x ananassa HOM05D003739 ORTHO05D003996 8.2e-11 72.8 270 31.1
Thhalv10000433m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 1.1e-10 72.4 75 53.3
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis HOM05D003739 ORTHO05D003996 1.4e-10 72.0 143 32.2
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis HOM05D003739 ORTHO05D003996 1.4e-10 72.0 143 32.2
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis HOM05D003739 ORTHO05D003996 3.1e-10 70.9 159 30.8
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 4.5e-09 67.0 181 32.6
Manes.04G075172 Manihot esculenta HOM05D003739 ORTHO05D003996 5.9e-09 66.6 57 59.6
Glyma.20G185167 Glycine max HOM05D003739 ORTHO05D003996 1.3e-08 65.5 74 41.9
RcHm_v2.0_Chr6g0265821 Rosa chinensis HOM05D003739 ORTHO05D003996 1.3e-08 65.5 120 38.3
MELO3C005063.2 Cucumis melo HOM05D003739 ORTHO05D003996 1.7e-08 65.1 121 38.0
FvH4_2g09510 Fragaria vesca HOM05D003739 ORTHO05D003996 8.5e-08 62.8 509 24.6
MCO01G601 Micromonas commoda HOM05D003739 ORTHO05D003996 1.5e-07 62.0 68 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1462 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-07 60.8 250 24.8
FAN15G1290 Fragaria x ananassa HOM05D003739 ORTHO05D003996 5.5e-07 60.1 129 34.9
Aa31sc736G10 Aethionema arabicum HOM05D003739 ORTHO05D003996 7.2e-07 59.7 92 44.6
CDE02G4347 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 9.4e-07 59.3 55 49.1


User provided reference genes

Program Settings