Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G14720 Aethionema arabicum HOM05D002243 ORTHO05D001848 6.9e-140 501.5 464 100.0
AL7G12850 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 6.0e-43 179.5 313 49.2
CARHR246210 Cardamine hirsuta HOM05D002243 ORTHO05D001848 1.8e-39 167.9 297 47.5
Carub.0007s0242 Capsella rubella HOM05D002243 ORTHO05D001848 7.6e-38 162.5 327 49.2
AT4G37820 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 2.4e-31 141.0 329 44.7
BraA08t34249Z Brassica rapa HOM05D002243 ORTHO05D001848 3.5e-27 127.1 299 42.8
A08p22860 Brassica napus HOM05D002243 ORTHO05D001848 3.3e-25 120.6 287 43.6
C03p79030 Brassica napus HOM05D002243 ORTHO05D001848 9.6e-25 119.0 296 40.5
THA.LOC104807645 Tarenaya hassleriana HOM05D002243 ORTHO05D001848 8.1e-24 115.9 396 37.6
BraA04t17359Z Brassica rapa HOM05D002243 ORTHO05D001848 1.6e-19 101.7 360 35.6
Thhalv10024837m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 1.3e-18 98.6 362 33.7
Sp4g01810 Schrenkiella parvula HOM05D002243 ORTHO05D001848 1.3e-18 98.6 375 36.3
A04p17320 Brassica napus HOM05D002243 ORTHO05D001848 1.9e-17 94.7 361 35.7
Thhalv10000072m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 4.3e-17 93.6 357 33.3
BcaC01g00374 Brassica carinata HOM05D002243 ORTHO05D001848 7.4e-17 92.8 294 40.1
BolC3t20144H Brassica oleracea HOM05D002243 ORTHO05D001848 7.4e-17 92.8 294 40.1
AL4G12330 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 4.5e-14 83.6 447 31.5
Carub.0004s0193 Capsella rubella HOM05D002243 ORTHO05D001848 9.3e-12 75.9 114 48.2
BcaB06g27840 Brassica carinata HOM05D002243 ORTHO05D001848 7.9e-11 72.8 315 30.2
AT2G22795 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 1.0e-10 72.4 114 49.1
BcaC02g08599 Brassica carinata HOM05D002243 ORTHO05D001848 1.3e-10 72.0 91 50.5
BolC4t26786H Brassica oleracea HOM05D002243 ORTHO05D001848 1.3e-10 72.0 91 50.5
Aa31LG7G14010 Aethionema arabicum HOM05D002243 ORTHO05D001848 1.9e-09 68.2 248 34.3
CARHR114080 Cardamine hirsuta HOM05D002243 ORTHO05D001848 3.3e-09 67.4 351 34.5
A09p57220 Brassica napus HOM05D002243 ORTHO05D001848 5.6e-09 66.6 129 41.1
BcaC07g41022 Brassica carinata HOM05D002243 ORTHO05D001848 7.4e-09 66.2 112 46.4
C08p40260 Brassica napus HOM05D002243 ORTHO05D001848 7.4e-09 66.2 112 46.4
BolC8t51594H Brassica oleracea HOM05D002243 ORTHO05D001848 7.4e-09 66.2 112 46.4
Lalb_Chr06g0164961 Lupinus albus HOM05D002243 ORTHO05D001848 1.1e-07 62.4 109 42.2
Glyma.05G110000 Glycine max HOM05D002243 ORTHO05D001848 1.8e-07 61.6 68 54.4
Glyma.17G157100 Glycine max HOM05D002243 ORTHO05D001848 2.4e-07 61.2 68 52.9
COL.COLO4_17804 Corchorus olitorius HOM05D002243 ORTHO05D001848 9.0e-07 59.3 305 30.5
Potri.007G008600 Populus trichocarpa HOM05D002243 ORTHO05D001848 9.0e-07 59.3 67 50.7
TWI77G0733 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 9.0e-07 59.3 68 47.1
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 1.2e-06 58.9 81 46.9
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 1.2e-06 58.9 107 40.2
CsaV3_6G044480 Cucumis sativus L. HOM05D002243 ORTHO05D001848 1.2e-06 58.9 106 43.4
BraA09t41115Z Brassica rapa HOM05D002243 ORTHO05D001848 2.6e-06 57.8 351 29.6
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 2.6e-06 57.8 279 29.4
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 3.4e-06 57.4 73 45.2
VMungo0251G3413 Vigna mungo HOM05D002243 ORTHO05D001848 3.4e-06 57.4 69 52.2
arahy.Tifrunner.gnm1.ann1.2Q65GK Arachis hypogaea HOM05D002243 ORTHO05D001848 4.5e-06 57.0 105 41.9
arahy.Tifrunner.gnm1.ann1.XGM7WG Arachis hypogaea HOM05D002243 ORTHO05D001848 4.5e-06 57.0 229 32.3
PGR004G1094 Punica granatum HOM05D002243 ORTHO05D001848 5.8e-06 56.6 184 38.0
Sabra07G0006700 Salix brachista HOM05D002243 ORTHO05D001848 7.6e-06 56.2 68 47.1
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 1.0e-05 55.8 73 45.2
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 1.0e-05 55.8 72 47.2
Medtr1g105890 Medicago truncatula HOM05D002243 ORTHO05D001848 1.0e-05 55.8 108 38.0
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 1.0e-05 55.8 107 39.3


User provided reference genes

Program Settings