Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 2.9e-73 278.5 141 100.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 7.6e-58 227.3 163 76.7
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 1.7e-57 226.1 163 76.7
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 2.9e-57 225.3 164 76.2
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 4.9e-57 224.6 164 76.8
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 4.2e-56 221.5 163 74.8
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.5e-55 218.4 174 70.7
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.5e-55 218.4 174 70.7
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 4.6e-55 218.0 162 73.5
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.3e-54 216.5 159 74.8
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 6.7e-54 214.2 158 74.1
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 4.3e-53 211.5 170 70.0
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 7.4e-53 210.7 170 68.8
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 3.1e-51 205.3 169 68.0
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 1.4e-43 179.9 161 64.6
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-40 169.9 149 65.8
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 1.4e-40 169.9 149 65.8
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 2.7e-39 165.6 161 55.3
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 1.8e-38 162.9 161 50.9
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.5e-37 159.8 161 52.2
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 1.9e-37 159.5 160 51.2
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 4.3e-37 158.3 160 50.0
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 9.6e-37 157.1 152 55.3
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 2.1e-36 156.0 162 52.5
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 8.2e-36 154.1 161 51.6
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 8.2e-36 154.1 161 49.7
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 3.1e-35 152.1 159 56.0
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 6.9e-35 151.0 157 51.6
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 2.6e-34 149.1 162 54.3
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 4.5e-34 148.3 157 50.3
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.0e-33 147.1 159 50.3
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.3e-33 146.7 160 47.5
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 5.0e-33 144.8 160 49.4
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 6.5e-33 144.4 159 51.6
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 1.4e-32 143.3 160 49.4
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.9e-32 142.9 157 51.0
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 7.2e-32 141.0 159 47.8
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 9.3e-32 140.6 149 49.7
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 9.3e-32 140.6 159 50.9
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 1.2e-31 140.2 151 49.0
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 1.2e-31 140.2 160 49.4
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 2.7e-31 139.0 150 49.3
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.6e-31 138.3 164 48.8
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 7.9e-31 137.5 161 49.1
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.0e-30 137.1 153 46.4
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.8e-30 136.3 164 46.3
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 5.1e-30 134.8 159 47.8
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 6.7e-30 134.4 162 49.4
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 8.7e-30 134.0 119 66.4
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 8.7e-30 134.0 162 48.1
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 1.5e-29 133.3 175 48.0
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.9e-29 132.9 173 45.7
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 7.4e-29 131.0 156 48.1
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 2.2e-28 129.4 145 50.3
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 2.8e-28 129.0 158 45.6
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 3.7e-28 128.6 161 46.6
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 6.3e-28 127.9 157 44.6
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 6.3e-28 127.9 150 47.3
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 8.2e-28 127.5 152 43.4
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.1e-27 127.1 126 46.0
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 1.4e-27 126.7 157 44.6
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 4.1e-27 125.2 163 43.6
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 5.3e-27 124.8 164 44.5
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 6.9e-27 124.4 129 51.2
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 1.2e-26 123.6 160 44.4
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.5e-26 123.2 158 45.6
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.5e-26 123.2 124 54.0
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 2.6e-26 122.5 149 45.6
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.6e-26 122.5 148 41.2
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 2.6e-26 122.5 138 51.4
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.4e-26 122.1 156 39.7
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 4.5e-26 121.7 143 42.0
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 4.5e-26 121.7 148 41.9
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 7.7e-26 120.9 163 42.9
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 1.3e-25 120.2 139 46.0
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 5.0e-25 118.2 147 42.9
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 8.5e-25 117.5 163 41.7
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 4.2e-24 115.2 148 39.2
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 5.5e-24 114.8 152 40.8
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 1.2e-23 113.6 146 44.5
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 6.1e-23 111.3 156 41.0
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 7.9e-23 110.9 150 38.7
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 7.9e-23 110.9 152 40.1
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.8e-22 109.8 165 41.8
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 3.0e-22 109.0 153 39.2
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 3.9e-22 108.6 165 35.8
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 3.9e-22 108.6 162 40.7
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 5.1e-22 108.2 166 35.5
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 1.5e-21 106.7 161 36.6
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 2.6e-21 105.9 160 43.1
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 3.7e-20 102.1 164 39.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.4e-19 100.1 149 36.9
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.8e-19 99.8 116 49.1
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 4.1e-19 98.6 140 41.4
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 7.7e-18 94.4 54 92.6
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 3.8e-17 92.0 104 53.8
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 6.5e-17 91.3 54 92.6
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 6.5e-17 91.3 54 92.6
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 2.5e-16 89.4 119 41.2
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.2e-15 87.0 142 35.9
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.1e-15 86.3 121 42.1
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 7.9e-15 84.3 148 33.8
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.3e-14 82.8 112 42.0
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 3.0e-14 82.4 99 51.5
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.5e-13 80.1 109 42.2
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 2.6e-13 79.3 61 55.7
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 4.4e-13 78.6 51 72.5
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 1.7e-12 76.6 50 68.0
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 7.0e-11 71.2 53 52.8
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 1.2e-10 70.5 118 33.9
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 1.6e-10 70.1 135 32.6
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 2.6e-10 69.3 113 35.4
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 3.5e-10 68.9 138 31.2
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.3e-09 67.0 104 36.5
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 2.2e-09 66.2 151 29.8
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 1.2e-07 60.5 52 55.8
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 1.2e-07 60.5 132 30.3
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 1.6e-07 60.1 52 51.9
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 2.1e-07 59.7 51 52.9
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 6.1e-07 58.2 70 41.4
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.4e-06 57.0 100 35.0
PGSC0003DMG400001805 Solanum tuberosum HOM05D005192 ORTHO05D006023 8.8e-06 54.3 133 29.3


User provided reference genes

Program Settings