Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 5.3e-125 451.1 233 100.0
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 4.0e-96 355.1 233 81.5
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 2.6e-95 352.4 232 81.0
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 5.4e-93 344.7 229 79.9
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 2.3e-91 339.3 233 79.0
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 1.5e-90 336.7 234 76.9
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 1.9e-90 336.3 233 77.3
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 5.2e-88 328.2 233 76.4
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 4.4e-87 325.1 237 75.9
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 3.7e-86 322.0 218 79.8
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 1.4e-85 320.1 243 73.7
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 5.8e-71 271.6 239 61.5
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 3.2e-69 265.8 232 61.6
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 4.2e-69 265.4 232 59.9
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 3.5e-68 262.3 233 58.8
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 6.0e-68 261.5 231 59.7
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 1.7e-67 260.0 231 59.7
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 2.3e-67 259.6 232 59.5
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 8.7e-67 257.7 231 60.2
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 8.7e-67 257.7 231 60.2
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 8.7e-67 257.7 235 59.6
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 8.7e-67 257.7 232 58.6
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 1.9e-66 256.5 231 59.7
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 1.9e-66 256.5 232 58.6
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 9.6e-66 254.2 232 59.5
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 1.3e-65 253.8 227 59.5
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 1.3e-65 253.8 235 59.1
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.3e-65 253.8 232 59.5
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 6.2e-65 251.5 232 58.2
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 1.1e-64 250.8 232 58.2
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.8e-64 250.0 230 58.7
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 2.4e-64 249.6 232 58.6
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 3.1e-64 249.2 240 56.7
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 3.1e-64 249.2 234 59.0
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 3.1e-64 249.2 233 58.4
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 4.0e-64 248.8 234 58.1
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 4.0e-64 248.8 231 58.4
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 4.0e-64 248.8 233 58.8
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 1.2e-63 247.3 241 56.8
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.6e-63 246.1 234 58.5
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 2.6e-63 246.1 232 57.8
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 3.4e-63 245.7 227 62.6
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 4.5e-63 245.4 235 57.0
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 4.5e-63 245.4 242 55.8
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 1.3e-62 243.8 217 60.8
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 1.7e-62 243.4 234 57.3
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 2.2e-62 243.0 225 58.7
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 3.8e-62 242.3 234 56.4
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 4.9e-62 241.9 233 57.1
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 8.4e-62 241.1 232 59.5
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 8.4e-62 241.1 232 56.9
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 1.4e-61 240.4 232 60.3
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 1.4e-61 240.4 225 57.8
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 4.2e-61 238.8 232 56.5
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 5.4e-61 238.4 211 59.2
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 7.1e-61 238.0 230 55.2
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 2.7e-60 236.1 232 55.2
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 3.5e-60 235.7 232 56.9
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 4.6e-60 235.3 234 54.7
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 1.3e-59 233.8 235 55.7
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 1.8e-59 233.4 232 53.9
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 3.9e-59 232.3 209 57.4
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 6.7e-59 231.5 234 56.0
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 1.1e-58 230.7 232 55.6
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 1.5e-58 230.3 235 56.2
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 1.9e-58 229.9 232 53.9
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 1.9e-58 229.9 232 53.9
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 4.3e-58 228.8 232 55.6
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 4.0e-56 222.2 238 52.1
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 4.0e-56 222.2 247 51.4
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 1.2e-55 220.7 233 51.9
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 9.9e-55 217.6 232 54.7
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 2.2e-54 216.5 232 50.0
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 3.8e-54 215.7 238 50.8
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 4.9e-54 215.3 231 50.2
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 3.2e-53 212.6 232 51.7
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 5.5e-53 211.8 216 51.9
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 1.2e-52 210.7 232 49.6
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 6.0e-52 208.4 202 55.4
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 7.9e-52 208.0 232 50.0
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 8.2e-49 198.0 176 62.5
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 1.1e-48 197.6 114 86.8
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.8e-48 196.8 161 61.5
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 3.1e-48 196.1 229 48.9
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 9.0e-48 194.5 181 56.9
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 9.0e-48 194.5 199 51.8
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 7.6e-47 191.4 162 63.0
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 1.0e-46 191.0 112 86.6
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 6.0e-44 181.8 162 60.5
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 9.7e-42 174.5 203 46.8
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 3.4e-39 166.0 247 40.9
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 2.1e-36 156.8 152 55.9
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 3.0e-35 152.9 157 53.5
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 5.1e-35 152.1 226 39.8
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 1.9e-34 150.2 152 55.3
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 2.8e-33 146.4 121 62.8
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 8.2e-33 144.8 211 40.8
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 4.5e-31 139.0 216 40.7
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 3.6e-28 129.4 117 59.0
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 1.9e-21 107.1 210 38.6
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.7e-20 103.2 119 48.7
Ah.03g144920 Amaranthus hybridus HOM05D007198 ORTHO05D008969 2.6e-18 96.7 81 60.5
vmacro17948 Vaccinium macrocarpon HOM05D007198 ORTHO05D008969 5.7e-18 95.5 99 54.5
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 3.2e-13 79.7 82 54.9
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 3.6e-12 76.3 211 29.4
Hund16330 Selenicereus undatus HOM05D007198 ORTHO05D008969 4.7e-12 75.9 49 75.5
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 3.0e-11 73.2 64 56.2
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 6.7e-11 72.0 160 33.8
RcHm_v2.0_Chr3g0472951 Rosa chinensis HOM05D007198 ORTHO05D008969 1.5e-10 70.9 47 70.2
Cre01.g037900 Chlamydomonas reinhardtii HOM05D007198 ORTHO05D008969 1.3e-09 67.8 243 24.7
MD07G1022300 Malus domestica HOM05D007198 ORTHO05D008969 1.1e-08 64.7 48 60.4
C02p45650 Brassica napus HOM05D027276 ORTHO05D024192 1.3e-06 57.8 34 82.4


User provided reference genes

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