Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.5e-186 655.2 310 100.0
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 2.3e-155 552.4 327 81.3
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.9e-155 551.6 327 81.0
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.6e-153 545.0 327 78.9
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 7.5e-151 537.3 320 80.6
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.7e-150 536.2 328 79.0
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 8.3e-150 533.9 322 79.2
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 6.6e-147 524.2 314 79.3
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.1e-144 516.9 328 77.1
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 9.9e-143 510.4 302 79.8
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 9.9e-143 510.4 302 79.8
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.9e-142 508.1 336 74.1
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.1e-140 502.7 330 73.6
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 4.6e-140 501.5 320 77.2
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 6.7e-123 444.5 311 66.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 4.0e-120 435.3 305 65.6
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 5.3e-120 434.9 306 64.7
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.2e-119 433.7 308 65.6
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 3.4e-119 432.2 305 65.2
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 5.8e-119 431.4 316 63.3
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 9.9e-119 430.6 309 64.7
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.9e-118 429.1 297 66.7
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 4.9e-118 428.3 317 65.3
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.9e-117 426.4 322 62.7
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.3e-115 420.2 294 66.3
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.8e-115 419.9 322 60.6
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.3e-115 419.5 327 59.9
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 3.9e-115 418.7 316 61.1
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.9e-114 416.4 318 61.9
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 2.5e-114 416.0 313 61.3
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.3e-114 415.6 327 58.7
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 2.1e-113 412.9 329 59.0
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.8e-113 412.5 312 61.5
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 4.8e-113 411.8 262 74.8
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.8e-112 409.8 321 59.8
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.8e-112 409.8 320 59.1
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.4e-112 409.5 295 63.1
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 4.0e-112 408.7 306 61.8
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 6.9e-112 407.9 329 58.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.2e-111 407.1 311 60.8
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.2e-111 407.1 320 58.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.2e-111 407.1 306 60.1
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 4.5e-111 405.2 295 62.7
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.7e-110 403.3 329 56.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.7e-110 403.3 327 58.1
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.9e-110 402.5 309 58.9
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 4.9e-110 401.7 294 62.9
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.5e-109 399.4 295 62.4
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.2e-109 399.1 295 62.7
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.6e-108 396.7 324 57.1
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 2.1e-108 396.4 329 56.5
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.1e-108 396.4 329 56.5
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 3.5e-108 395.6 309 59.2
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 3.5e-108 395.6 295 62.0
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 4.6e-108 395.2 313 58.8
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 4.6e-108 395.2 296 61.8
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.3e-107 393.7 344 55.8
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.3e-107 393.7 307 59.6
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.8e-107 393.3 313 58.5
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.8e-107 393.3 295 61.4
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 3.9e-107 392.1 313 58.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 5.1e-107 391.7 299 59.2
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.1e-106 390.6 308 58.8
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 3.3e-106 389.0 307 60.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 5.7e-106 388.3 321 57.6
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 9.7e-106 387.5 295 61.0
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.8e-104 383.3 324 58.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 2.0e-103 379.8 366 52.5
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 5.0e-102 375.2 318 54.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 7.2e-101 371.3 315 53.7
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 4.6e-100 368.6 319 55.5
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 7.9e-100 367.9 289 59.2
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.0e-99 367.5 295 58.0
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.1e-99 365.2 311 54.7
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.5e-98 363.6 322 56.5
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 9.7e-98 360.9 276 60.9
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.4e-96 356.3 322 55.3
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 5.3e-96 355.1 367 49.6
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.5e-93 345.1 306 57.5
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.4e-88 330.5 337 51.3
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.3e-86 323.9 295 53.6
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.7e-86 323.6 317 51.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.9e-85 320.1 363 47.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 7.2e-85 318.2 339 47.5
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 7.4e-82 308.1 264 54.9
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.3e-81 307.4 264 56.8
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 9.7e-74 281.2 186 72.6
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.8e-73 279.6 312 48.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 5.3e-72 275.4 209 60.8
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 7.7e-71 271.6 201 63.2
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 5.0e-70 268.9 306 45.4
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.2e-65 253.4 176 63.6
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 8.3e-65 251.5 305 41.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 8.6e-62 241.5 297 41.1
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 2.7e-55 219.9 312 36.5
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.3e-54 216.9 291 39.9
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 5.6e-53 212.2 183 56.3
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 7.3e-53 211.8 240 49.2
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.4e-50 202.6 312 36.2
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 9.8e-50 201.4 165 57.0
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.7e-49 199.5 165 56.4
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 6.4e-49 198.7 299 40.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 8.3e-49 198.4 294 38.8
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 6.0e-47 192.2 116 72.4
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.0e-46 191.4 166 55.4
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 7.3e-37 158.7 321 31.2
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 4.9e-33 146.0 96 66.7
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 2.4e-32 143.7 185 42.2
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.0e-30 138.3 139 49.6
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.6e-28 131.0 129 50.4
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-25 121.3 278 32.7
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.2e-25 120.6 135 46.7
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.8e-20 103.6 107 47.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.7e-15 87.0 51 68.6
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.0e-14 85.1 51 66.7
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 3.9e-14 83.2 78 51.3
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 5.1e-14 82.8 108 39.8
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.6e-13 79.3 116 38.8
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 6.2e-12 75.9 107 39.3


User provided reference genes

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