Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 2.8e-42 174.9 89 100.0
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 7.7e-40 166.8 89 94.4
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.3e-39 166.0 89 94.4
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.3e-39 166.0 89 94.4
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.7e-39 165.6 89 94.4
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 3.8e-39 164.5 89 93.3
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 5.0e-39 164.1 89 93.3
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 5.0e-39 164.1 89 93.3
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 6.5e-39 163.7 89 92.1
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 8.5e-39 163.3 89 93.3
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.9e-38 162.2 89 92.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.4e-33 146.0 89 84.3
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 5.3e-33 144.1 89 83.1
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 5.3e-33 144.1 89 83.1
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 7.0e-33 143.7 89 82.0
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 1.6e-32 142.5 88 83.0
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 2.6e-32 141.7 89 79.8
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 4.5e-32 141.0 89 80.9
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 5.9e-32 140.6 86 82.6
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.0e-31 139.8 89 79.8
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.0e-31 139.8 89 79.8
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.3e-31 139.4 89 79.8
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 1.3e-31 139.4 89 79.8
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.7e-31 139.0 86 80.2
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.7e-31 139.0 86 81.4
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.9e-31 138.3 89 78.7
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.9e-31 138.3 89 78.7
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.8e-31 137.9 89 80.9
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 6.5e-31 137.1 89 79.8
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 6.5e-31 137.1 89 77.5
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 8.5e-31 136.7 89 77.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 8.5e-31 136.7 89 77.5
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 5.5e-30 134.0 85 77.6
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 5.5e-30 134.0 89 74.2
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 7.2e-30 133.7 89 78.7
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 7.2e-30 133.7 89 75.3
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 7.2e-30 133.7 88 77.3
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 9.4e-30 133.3 86 79.1
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 9.4e-30 133.3 86 79.1
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.2e-29 132.9 88 77.3
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.2e-29 132.9 89 73.0
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 2.7e-29 131.7 86 76.7
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.7e-29 131.7 87 75.9
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 82.7
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 4.7e-29 131.0 81 84.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 4.7e-29 131.0 81 84.0
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 74.2
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 78.7
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 73.0
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.0e-28 129.8 85 78.8
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.0e-28 129.8 85 78.8
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.4e-28 129.4 88 73.9
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.8e-28 129.0 89 77.5
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.3e-28 128.6 82 81.7
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.0e-28 128.3 85 76.5
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 3.0e-28 128.3 82 79.3
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 4.0e-28 127.9 84 78.6
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.0e-28 127.9 86 74.4
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 5.2e-28 127.5 84 77.4
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 6.7e-28 127.1 84 77.4
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 6.7e-28 127.1 86 74.4
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 6.7e-28 127.1 86 73.3
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 8.8e-28 126.7 81 77.8
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.2e-27 126.3 86 73.3
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.5e-27 125.9 91 69.2
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.5e-27 125.9 86 73.3
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 2.6e-27 125.2 89 70.8
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 7.5e-27 123.6 82 70.7
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 9.7e-27 123.2 81 77.8
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 2.2e-26 122.1 89 70.8
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 4.1e-25 117.9 89 65.2
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 4.1e-25 117.9 88 68.2
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.6e-24 115.9 86 66.3
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 4.5e-24 114.4 89 66.3
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 4.5e-24 114.4 83 68.7
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 5.9e-24 114.0 90 68.9
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.3e-23 112.8 87 66.7
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.8e-23 111.3 74 77.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 5.0e-23 110.9 89 65.2
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 8.5e-23 110.2 76 73.7
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.1e-22 109.8 72 77.8
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.1e-21 105.5 72 76.4
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 4.7e-21 104.4 83 68.7
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.8e-20 102.4 69 73.9
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 3.0e-20 101.7 73 67.1
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 8.8e-20 100.1 75 77.3
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 8.8e-20 100.1 82 65.9
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.2e-19 99.8 69 72.5
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.5e-19 99.4 73 67.1
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.0e-19 99.0 77 74.0
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.6e-19 98.6 85 58.8
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.7e-18 95.9 64 78.1
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 4.8e-18 94.4 83 63.9
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.8e-17 92.4 61 75.4
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 7.0e-17 90.5 81 55.6
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.2e-16 89.7 62 74.2
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 2.7e-16 88.6 75 61.3
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.7e-16 88.6 77 61.0
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.5e-16 88.2 56 82.1
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.2e-14 81.3 64 67.2
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 5.5e-14 80.9 74 54.1
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 4.7e-13 77.8 88 53.4
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.4e-12 76.3 51 68.6
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 4.0e-12 74.7 50 72.0
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.5e-11 72.8 89 55.1
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 2.6e-11 72.0 88 48.9
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 9.2e-09 63.5 62 45.2
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.2e-08 63.2 56 58.9


User provided reference genes

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