Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 0.0e+00 1456.4 768 100.0
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 8.2e-239 830.9 795 62.9
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.1e-232 810.4 762 63.4
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.4e-225 786.9 796 61.3
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 9.1e-222 774.2 816 58.6
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 3.9e-217 758.8 823 57.8
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 2.4e-214 749.6 799 57.6
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 2.1e-210 736.5 822 56.3
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 2.2e-207 726.5 792 57.1
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 1.2e-205 720.7 806 56.3
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.3e-204 717.2 787 56.5
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 8.5e-204 714.5 792 56.6
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.9e-203 713.4 806 56.2
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.9e-179 633.6 876 49.3
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.3e-177 626.7 875 49.1
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 1.5e-176 624.0 874 49.3
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 2.2e-167 593.6 853 48.4
BcaC09g51502 Brassica carinata HOM05D010718 ORTHO05D008037 2.4e-105 387.5 637 44.7
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 3.5e-48 197.6 815 30.7
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 3.5e-48 197.6 792 29.3
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.5e-46 192.2 819 30.3
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.5e-46 191.4 855 30.2
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.2e-45 189.1 840 28.2
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.8e-44 185.3 830 30.6
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 8.9e-44 183.0 833 30.7
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.9e-42 177.9 865 29.9
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 1.1e-41 176.0 802 28.1
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 2.4e-41 174.9 831 29.8
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.2e-41 174.1 845 30.4
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 7.1e-41 173.3 835 29.2
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 2.1e-40 171.8 794 29.1
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.8e-40 169.9 869 29.5
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 8.1e-37 159.8 786 28.0
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 1.1e-36 159.5 956 26.7
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 5.8e-35 153.7 768 28.1
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 7.6e-35 153.3 836 29.2
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 2.2e-34 151.8 861 26.4
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 4.9e-34 150.6 821 26.4
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 9.3e-33 146.4 768 29.0
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.5e-32 144.4 848 27.0
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.0e-31 142.9 795 26.8
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 3.9e-31 141.0 834 28.7
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 3.9e-31 141.0 812 27.2
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 6.6e-31 140.2 789 28.3
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.1e-30 139.4 776 27.7
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 2.5e-30 138.3 255 42.4
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.3e-29 136.0 829 28.0
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 2.8e-29 134.8 804 28.1
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.4e-28 132.5 767 26.2
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 1.8e-28 132.1 819 25.9
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 3.4e-27 127.9 847 26.1
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 9.9e-27 126.3 809 28.2
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.2e-26 125.2 796 27.5
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 3.8e-26 124.4 759 26.6
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 1.4e-25 122.5 742 27.8
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 3.2e-25 121.3 369 33.1
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 7.1e-25 120.2 827 25.8
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 9.3e-25 119.8 787 26.8
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.2e-24 119.4 808 25.5
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 2.1e-24 118.6 768 26.2
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 3.5e-24 117.9 839 26.9
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 4.6e-24 117.5 771 25.8
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 4.6e-24 117.5 804 26.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.9e-22 112.1 914 25.4
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.6e-22 110.5 872 26.0
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 5.6e-22 110.5 253 36.0
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 7.4e-22 110.2 928 25.2
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 2.1e-21 108.6 277 34.7
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.4e-20 105.9 839 26.3
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 3.1e-20 104.8 185 44.3
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 3.1e-20 104.8 853 25.0
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 4.0e-20 104.4 829 25.1
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 7.6e-19 100.1 166 45.2
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.7e-18 99.0 789 25.3
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.7e-18 99.0 122 49.2
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.2e-18 98.6 821 24.0
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 2.2e-18 98.6 250 35.6
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 2.9e-18 98.2 858 25.1
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 6.7e-15 87.0 111 48.6
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 6.7e-15 87.0 192 35.4
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.1e-14 86.3 269 30.9
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 1.1e-14 86.3 181 37.6
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 3.3e-14 84.7 260 30.0
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 4.3e-14 84.3 530 25.7
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 7.4e-14 83.6 122 42.6
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.3e-13 82.8 136 41.2
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 2.1e-13 82.0 875 23.5
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 2.1e-13 82.0 255 34.1
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 4.8e-13 80.9 749 25.4
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 6.3e-13 80.5 58 63.8
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 5.3e-12 77.4 889 22.8
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.4e-11 74.7 69 50.7
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 4.5e-11 74.3 59 54.2
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 7.6e-11 73.6 107 43.9
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 1.3e-10 72.8 132 37.1
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.5e-09 68.6 775 23.2
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 3.2e-09 68.2 730 24.1
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 5.5e-09 67.4 171 33.3
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 1.2e-08 66.2 40 72.5
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.1e-08 65.5 881 23.0
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.1e-08 65.5 881 22.9
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 3.6e-08 64.7 506 25.3
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 7.9e-08 63.5 64 53.1
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 1.8e-07 62.4 75 49.3
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.1e-06 59.7 65 47.7
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 2.5e-06 58.5 65 46.2
BcaC03g14775 Brassica carinata HOM05D010718 ORTHO05D008037 3.3e-06 58.2 86 46.5


User provided reference genes

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