Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G11940 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.3e-92 343.2 188 100.0
Aa31LG6G11930 Aethionema arabicum HOM05D008191 ORTHO05D010044 6.1e-71 271.2 135 100.0
Aa31LG7G5280 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.4e-67 258.1 167 77.8
Aa31sc1921G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.4e-67 258.1 167 77.8
Aa31sc1930G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.4e-67 258.1 167 77.8
Aa31LG6G6270 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.3e-46 189.5 163 62.0
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.2e-43 177.6 167 55.7
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.2e-43 177.6 167 55.7
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-31 139.4 167 47.3
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.2e-27 124.4 168 44.0
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.0e-22 109.0 168 41.1
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.0e-22 109.0 167 41.3
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 2.7e-18 96.3 168 31.0
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 6.0e-18 95.1 168 31.5
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 5.1e-17 92.0 168 30.4
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 8.7e-17 91.3 168 32.7
Aa31LG5G5540 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.5e-16 89.7 171 36.3
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 5.6e-16 88.6 171 32.2
Aa31LG5G5530 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.1e-15 86.7 168 32.7
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 3.1e-14 82.8 168 28.6
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 4.5e-13 79.0 164 30.5
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 4.5e-13 79.0 164 30.5
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.4e-12 74.7 98 39.8
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 8.4e-12 74.7 168 31.0
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 8.4e-12 74.7 165 27.9
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.1e-11 74.3 142 32.4
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 3.2e-11 72.8 164 27.4
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 9.3e-11 71.2 164 29.3
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.6e-10 70.5 172 29.1
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 6.7e-09 65.1 154 28.6
Carub.0007s2161 Capsella rubella HOM05D008191 ORTHO05D010044 8.7e-09 64.7 168 26.8
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.9e-08 63.5 173 27.2
Thhalv10017377m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 5.6e-08 62.0 137 28.5
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 1.6e-07 60.5 149 26.8
AT3G55680 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 1.1e-06 57.8 164 23.8
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 1.1e-06 57.8 155 29.7
AT2G31432 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 5.3e-06 55.5 172 26.2


User provided reference genes

Program Settings