Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 0.0e+00 1368.6 707 100.0
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 4.1e-269 931.4 709 71.2
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 2.7e-268 928.7 708 70.8
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 3.2e-266 921.8 712 70.8
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 3.2e-266 921.8 708 71.6
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.7e-265 917.9 712 70.4
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.4e-264 916.4 708 70.5
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 1.8e-264 916.0 712 69.9
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 8.8e-264 913.7 714 69.7
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 3.4e-263 911.8 712 69.8
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 4.4e-263 911.4 707 70.6
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 8.3e-262 907.1 710 69.6
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 2.0e-260 902.5 706 69.4
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 3.0e-235 818.9 710 63.9
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 3.4e-175 619.4 686 48.5
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 7.7e-175 618.2 704 48.4
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 5.5e-173 612.1 683 49.8
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 5.5e-173 612.1 710 48.0
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 6.7e-171 605.1 705 47.7
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 6.7e-171 605.1 692 48.0
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 6.7e-171 605.1 703 48.2
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 7.4e-170 601.7 693 48.2
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 1.7e-169 600.5 681 48.0
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 4.5e-167 592.4 672 48.1
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.3e-166 590.9 700 47.9
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 6.5e-166 588.6 690 47.0
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 3.6e-164 582.8 713 45.4
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 4.7e-164 582.4 688 47.7
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 3.0e-163 579.7 688 46.9
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 2.0e-162 577.0 682 47.4
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 3.3e-162 576.2 705 46.8
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 5.7e-162 575.5 692 47.4
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.4e-160 570.9 652 49.4
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 5.3e-160 568.9 667 46.9
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.6e-159 567.4 708 45.2
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 3.2e-157 559.7 711 45.6
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 3.2e-157 559.7 682 45.3
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.6e-156 557.4 709 47.2
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.8e-155 553.9 686 46.1
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 4.0e-155 552.7 701 45.9
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 5.7e-154 548.9 689 46.0
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 7.5e-154 548.5 700 45.4
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 2.2e-153 547.0 677 46.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 2.8e-153 546.6 708 45.6
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.8e-152 543.9 701 45.1
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 5.3e-152 542.3 671 45.3
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.6e-151 540.8 703 44.8
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.3e-150 537.7 666 46.1
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.7e-150 537.3 673 46.4
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 9.4e-149 531.6 689 44.7
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 1.6e-148 530.8 678 44.4
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.1e-148 530.4 693 45.7
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 2.7e-148 530.0 698 44.1
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 4.7e-148 529.3 700 43.3
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 4.7e-148 529.3 720 42.9
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 8.0e-148 528.5 687 45.0
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 4.0e-147 526.2 673 44.7
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.4e-146 523.1 704 44.6
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 1.1e-144 518.1 698 43.4
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.1e-144 516.5 704 43.9
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 4.1e-144 516.2 689 44.1
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.7e-143 513.5 692 43.9
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 8.6e-142 508.4 718 42.1
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 7.2e-141 505.4 681 43.6
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 1.8e-139 500.7 553 47.7
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.2e-138 498.0 716 41.6
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.3e-137 494.6 664 41.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 1.3e-137 494.6 669 43.0
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.4e-136 491.1 664 41.7
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 1.8e-136 490.7 707 40.7
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 2.3e-134 483.8 694 42.7
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 2.9e-134 483.4 661 42.2
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 5.0e-134 482.6 708 41.8
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 2.0e-127 460.7 490 52.7
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 1.7e-126 457.6 546 46.9
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 4.0e-123 446.4 731 39.3
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 8.3e-121 438.7 486 46.9
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.0e-118 431.8 489 47.4
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 4.3e-117 426.4 669 40.1
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 4.7e-116 422.9 489 47.4
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 8.1e-116 422.2 460 51.3
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 7.5e-114 415.6 667 37.3
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.1e-112 411.8 692 38.7
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.2e-111 408.3 588 39.8
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.5e-109 400.6 556 44.1
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 6.8e-107 392.5 694 37.5
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 2.2e-105 387.5 474 45.8
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 6.6e-102 375.9 698 36.0
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 1.1e-101 375.2 706 35.6
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 1.2e-100 371.7 482 44.6
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 1.4e-99 368.2 490 43.5
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 1.8e-99 367.9 472 44.5
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.5e-98 364.8 681 35.7
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 4.4e-98 363.2 410 47.8
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 6.4e-97 359.4 449 47.0
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 2.5e-93 347.4 591 36.2
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.6e-92 343.6 703 34.7
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.8e-91 341.3 509 41.7
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.7e-81 308.1 730 31.8
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.8e-78 298.1 660 33.3
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 8.4e-73 279.3 655 32.2
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 4.5e-58 230.3 347 40.3
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 8.0e-47 193.0 689 25.0
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 3.1e-43 181.0 271 40.2
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 9.1e-43 179.5 272 41.5
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 8.8e-38 162.9 687 25.0
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 5.7e-37 160.2 255 40.0
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.6e-34 152.1 322 33.5
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 7.0e-27 126.7 93 73.1
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 2.9e-25 121.3 278 32.7
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 3.8e-25 120.9 335 29.9
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 9.5e-24 116.3 202 36.1
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 5.4e-19 100.5 250 27.2
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 1.3e-17 95.9 125 49.6
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 3.1e-14 84.7 405 25.2
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.9e-12 78.2 76 51.3
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 1.3e-09 69.3 67 53.7
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.3e-09 68.6 227 29.5
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 9.5e-08 63.2 47 61.7
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.8e-07 61.6 103 40.8
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 4.0e-06 57.8 68 41.2
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 4.0e-06 57.8 68 41.2


User provided reference genes

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