Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.2e-146 522.7 509 100.0
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.9e-64 250.0 481 68.6
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 4.0e-48 196.8 465 67.7
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.1e-18 99.0 176 37.5
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 2.5e-18 97.8 172 37.8
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 3.3e-18 97.4 174 36.2
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 5.6e-18 96.7 175 36.0
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 7.3e-18 96.3 172 37.2
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 7.3e-18 96.3 93 49.5
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.2e-17 93.2 173 34.7
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-16 92.4 121 40.5
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 1.4e-16 92.0 121 40.5
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 3.1e-16 90.9 121 40.5
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 3.1e-16 90.9 121 40.5
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 4.0e-16 90.5 93 46.2
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 4.0e-16 90.5 121 39.7
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 5.2e-16 90.1 174 34.5
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 5.2e-16 90.1 172 34.9
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 6.8e-16 89.7 173 35.3
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 1.2e-15 89.0 175 33.1
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 1.5e-15 88.6 173 33.5
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 5.8e-15 86.7 176 35.2
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.7e-14 85.1 173 35.3
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.7e-14 85.1 173 34.7
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.1e-13 82.4 175 31.4
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.1e-13 82.4 169 34.9
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-13 82.0 169 34.9
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 4.1e-13 80.5 168 34.5
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 5.4e-13 80.1 175 33.7
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 5.4e-13 80.1 94 41.5
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 3.5e-12 77.4 120 36.7
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 3.5e-12 77.4 175 30.9
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 6.0e-12 76.6 175 29.7
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.7e-11 75.1 79 48.1
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 5.1e-11 73.6 114 38.6
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 5.1e-11 73.6 79 45.6
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 6.6e-11 73.2 171 32.2
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 6.6e-11 73.2 163 33.1
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 6.6e-11 73.2 163 33.1
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 8.6e-11 72.8 175 33.7
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 1.9e-10 71.6 170 32.4
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.5e-10 71.2 168 33.3
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 4.3e-10 70.5 171 31.0
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 5.6e-10 70.1 170 31.8
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 5.6e-10 70.1 170 31.8
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 1.2e-09 68.9 170 31.2
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 1.2e-09 68.9 170 31.2
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.1e-09 68.2 82 43.9
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 2.1e-09 68.2 170 30.6
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 2.1e-09 68.2 179 30.7
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 2.8e-09 67.8 170 31.8
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 3.6e-09 67.4 170 30.6
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 3.6e-09 67.4 170 30.6
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 3.6e-09 67.4 170 30.6
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 3.6e-09 67.4 170 30.6
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 4.7e-09 67.0 168 29.8
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 6.2e-09 66.6 179 30.2
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 6.2e-09 66.6 78 42.3
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 6.2e-09 66.6 100 37.0
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 8.1e-09 66.2 77 44.2
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 1.4e-08 65.5 172 30.2
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 8.9e-08 62.8 171 31.6
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.5e-07 62.0 79 40.5
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 1.5e-07 62.0 171 31.0
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 1.5e-07 62.0 171 31.0
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.5e-07 62.0 171 31.0
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-07 62.0 171 31.0
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-07 61.6 171 31.0
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-07 61.6 103 34.0
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 2.0e-07 61.6 175 30.9
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.6e-07 61.2 89 46.1
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 3.4e-07 60.8 88 44.3
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 4.4e-07 60.5 82 41.5
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 4.4e-07 60.5 95 36.8
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 4.4e-07 60.5 95 36.8
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.4e-07 60.5 99 35.4
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 5.8e-07 60.1 173 30.6
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 7.6e-07 59.7 119 36.1
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 9.9e-07 59.3 173 28.9
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 9.9e-07 59.3 173 28.9
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 9.9e-07 59.3 100 41.0
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 2.2e-06 58.2 80 45.0
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 2.9e-06 57.8 85 43.5
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 8.4e-06 56.2 173 28.3
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 8.4e-06 56.2 173 28.3
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 8.4e-06 56.2 174 31.6
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 8.4e-06 56.2 173 28.3


User provided reference genes

Program Settings