Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 0.0e+00 4816.5 2494 100.0
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 0.0e+00 4004.1 2533 82.4
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 0.0e+00 4003.0 2532 82.1
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 0.0e+00 3979.1 2534 81.9
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 0.0e+00 3975.2 2532 81.6
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 0.0e+00 3931.3 2538 81.0
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 0.0e+00 3828.9 2534 79.4
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 0.0e+00 3824.6 2566 78.6
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 0.0e+00 3820.8 2534 79.1
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 0.0e+00 3810.0 2566 78.3
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 0.0e+00 3709.8 2547 76.4
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 0.0e+00 3593.5 2240 83.6
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 0.0e+00 3162.5 2570 65.8
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 0.0e+00 3155.2 2567 65.6
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 0.0e+00 3154.8 2571 65.5
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 0.0e+00 3145.9 2577 65.3
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 0.0e+00 3131.3 2570 64.7
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 0.0e+00 3120.5 2573 64.7
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 0.0e+00 3113.6 2565 64.5
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 0.0e+00 3113.2 2564 65.2
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 0.0e+00 3107.4 2567 65.2
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 0.0e+00 3106.2 2581 65.1
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 0.0e+00 3105.9 2573 64.6
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 0.0e+00 3097.0 2592 64.5
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 0.0e+00 3093.1 2586 65.0
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 0.0e+00 3073.9 2608 63.8
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 0.0e+00 3063.5 2565 63.9
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 0.0e+00 3048.5 2556 63.8
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 0.0e+00 3047.3 2579 63.0
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 0.0e+00 3044.2 2554 63.9
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 0.0e+00 3041.5 2580 62.8
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 0.0e+00 3017.3 2565 63.5
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 0.0e+00 3016.1 2558 63.5
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 0.0e+00 3003.0 2639 62.9
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 0.0e+00 3001.8 2569 63.2
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 0.0e+00 3000.7 2577 63.0
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 0.0e+00 2992.6 2554 63.0
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 0.0e+00 2991.4 2566 63.0
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 0.0e+00 2988.4 2555 62.8
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 0.0e+00 2966.8 2605 61.6
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 0.0e+00 2965.3 2557 62.5
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 0.0e+00 2950.2 2564 62.2
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 0.0e+00 2947.1 2563 62.1
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 0.0e+00 2935.2 2576 61.3
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 0.0e+00 2933.3 2558 62.4
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 0.0e+00 2916.3 2576 61.3
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 0.0e+00 2891.7 2572 60.8
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 0.0e+00 2888.2 2554 61.3
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 0.0e+00 2865.5 2564 60.2
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 0.0e+00 2843.1 2879 55.7
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 0.0e+00 2842.0 2561 59.9
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 0.0e+00 2835.1 2565 60.0
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 0.0e+00 2810.8 2576 59.4
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 0.0e+00 2800.0 2260 66.3
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 0.0e+00 2784.2 2615 59.1
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 0.0e+00 2782.7 2554 58.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 0.0e+00 2755.7 2584 58.3
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 0.0e+00 2755.7 2552 58.7
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 0.0e+00 2747.2 2589 57.8
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 0.0e+00 2729.1 2364 62.1
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 0.0e+00 2711.0 2590 57.8
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 0.0e+00 2652.5 2565 56.9
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 0.0e+00 2647.1 2555 57.1
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 0.0e+00 2638.6 2557 56.7
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 0.0e+00 2614.3 2556 56.3
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 0.0e+00 2582.4 2436 58.0
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 0.0e+00 2571.6 2623 55.5
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 0.0e+00 2538.1 2109 65.1
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 0.0e+00 2412.9 1892 68.0
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 0.0e+00 2410.9 1910 67.9
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 0.0e+00 2376.3 2059 62.7
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 0.0e+00 2222.2 1761 67.8
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 0.0e+00 2218.4 1660 70.8
FAN20G0521 Fragaria x ananassa HOM05D004019 ORTHO05D005136 0.0e+00 2085.5 1824 61.6
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 0.0e+00 2084.7 2300 52.2
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 0.0e+00 1924.4 1757 60.3
Gohir.A05G049400 Gossypium hirsutum HOM05D004019 ORTHO05D005136 0.0e+00 1923.3 1741 60.2
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 0.0e+00 1884.4 2705 43.8
DCAR_006256 Daucus carota HOM05D004019 ORTHO05D005136 0.0e+00 1875.1 1784 59.1
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 0.0e+00 1792.3 1709 57.6
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 0.0e+00 1778.5 2438 45.1
Ah.12g060340 Amaranthus hybridus HOM05D004019 ORTHO05D005136 0.0e+00 1525.4 1401 60.4
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 0.0e+00 1474.5 2542 38.9
Hma1.2p1_0140F.1_g063770 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 0.0e+00 1447.2 1179 66.8
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 0.0e+00 1421.4 1055 71.6
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 0.0e+00 1419.8 1168 65.8
Hma1.2p1_0140F.1_g063760 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 0.0e+00 1417.5 1185 64.3
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 0.0e+00 1304.7 1166 62.5
Nitab4.5_0000250g0110 Nicotiana tabacum HOM05D004019 ORTHO05D005136 0.0e+00 1295.8 1490 49.1
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 0.0e+00 1291.9 2674 34.3
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 0.0e+00 1277.3 2549 35.7
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 0.0e+00 1274.6 1176 60.8
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 0.0e+00 1241.1 878 73.6
CDE10G0881 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 0.0e+00 1236.5 1616 46.0
SEGI_05898 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 0.0e+00 1180.6 1190 56.6
Nitab4.5_0002393g0030 Nicotiana tabacum HOM05D004019 ORTHO05D005136 0.0e+00 1161.7 1476 45.5
HPP92_006443 Vanilla planifolia HOM05D004019 ORTHO05D005136 0.0e+00 1141.3 1170 55.9
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 0.0e+00 1111.7 923 62.8
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 0.0e+00 1092.8 768 73.3
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 7.7e-254 882.5 696 67.4
HPP92_006442 Vanilla planifolia HOM05D004019 ORTHO05D005136 1.0e-253 882.1 1121 46.4
Haze_21654 Corylus avellana HOM05D004019 ORTHO05D005136 4.1e-231 807.0 558 77.8
vmacro11102 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.0e-229 802.4 1000 46.8
Haze_21656 Corylus avellana HOM05D004019 ORTHO05D005136 9.5e-228 795.8 908 49.4
SHI11646 Sapria himalayana HOM05D004019 ORTHO05D000023 1.0e-221 775.8 1036 46.1
Haze_21655 Corylus avellana HOM05D004019 ORTHO05D005136 1.3e-221 775.4 630 65.9
Ah.12g060350 Amaranthus hybridus HOM05D004019 ORTHO05D005136 7.6e-201 706.4 873 45.8
QL12p030952 Quercus lobata HOM05D004019 ORTHO05D005136 2.4e-191 674.9 740 51.4
Cpa.g.sc205.24 Carica papaya HOM05D004019 ORTHO05D005136 2.0e-185 655.2 493 69.6
SHI11647 Sapria himalayana HOM05D004019 ORTHO05D005136 9.3e-183 646.4 848 45.2
ClCG05G017320 Citrullus lanatus HOM05D004019 ORTHO05D005136 5.6e-172 610.5 682 49.4
Solyc08g068040.3 Solanum lycopersicum HOM05D004019 ORTHO05D005136 1.4e-167 595.9 662 48.5
Nitab4.5_0000250g0120 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.8e-165 589.0 822 46.6
Peaxi162Scf00105g00812 Petunia axillaris HOM05D004019 ORTHO05D005136 8.2e-163 580.1 663 46.3
Peaxi162Scf00105g00817 Petunia axillaris HOM05D004019 ORTHO05D005136 9.0e-154 550.1 487 58.5
Cpa.g.sc205.19 Carica papaya HOM05D004019 ORTHO05D005136 1.3e-152 546.2 491 59.1
Hund02996 Selenicereus undatus HOM05D004019 ORTHO05D005136 7.2e-151 540.4 591 55.8
Nitab4.5_0002393g0010 Nicotiana tabacum HOM05D004019 ORTHO05D005136 4.3e-148 531.2 406 66.5
DCAR_006255 Daucus carota HOM05D004019 ORTHO05D005136 1.0e-133 483.4 499 54.9
vmacro11103 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.0e-133 483.4 547 51.2
SalBow4G2655 Salvia bowleyana HOM05D004019 ORTHO05D005136 4.7e-118 431.4 489 47.6
SEGI_01785 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 2.7e-105 389.0 512 42.8
Os01g0593000 Oryza sativa ssp. japonica HOM05D004019 ORTHO05D005136 9.8e-100 370.5 286 66.8
vmacro11104 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 9.5e-95 354.0 239 77.8
Nitab4.5_0000250g0090 Nicotiana tabacum HOM05D004019 ORTHO05D005136 2.0e-84 319.7 180 86.7
unitig_747.g21874 Utricularia gibba HOM05D004019 ORTHO05D005136 7.8e-81 307.8 346 50.0
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 1.4e-77 297.0 228 66.7
Ah.12g060330 Amaranthus hybridus HOM05D004019 ORTHO05D005136 8.9e-77 294.3 180 78.9
Hma1.2p1_0140F.1_g063780 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 3.2e-74 285.8 206 76.7
DCAR_006257 Daucus carota HOM05D004019 ORTHO05D005136 1.9e-71 276.6 151 90.7
SEGI_29718 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 2.1e-70 273.1 158 82.3
Cpa.g.sc205.16 Carica papaya HOM05D004019 ORTHO05D005136 1.8e-69 270.0 322 48.1
Cfa013229 Carpinus fangiana HOM05D004019 ORTHO05D005136 2.4e-69 269.6 216 62.0
Haze_21653 Corylus avellana HOM05D004019 ORTHO05D005136 5.3e-69 268.5 210 63.3
SHI11644 Sapria himalayana HOM05D004019 ORTHO05D000014 1.9e-58 233.4 244 54.1
DCAR_006254 Daucus carota HOM05D004019 ORTHO05D005136 5.3e-53 215.3 303 42.2
Cc08_g08730 Coffea canephora HOM05D000021 ORTHO05D000010 7.9e-49 201.4 306 41.5
Cc00_g31360 Coffea canephora HOM05D004019 ORTHO05D005136 7.4e-47 194.9 310 39.4
PRCOL_00001920 Prasinoderma coloniale HOM05D004019 ORTHO05D005136 2.8e-46 193.0 1948 23.1
unitig_747.g21873 Utricularia gibba HOM05D004019 ORTHO05D005136 8.5e-43 181.4 300 39.3
Nitab4.5_0000250g0100 Nicotiana tabacum HOM05D004019 ORTHO05D005136 4.3e-39 169.1 151 53.0
SHI11640 Sapria himalayana HOM05D004019 ORTHO05D000023 6.3e-38 165.2 277 38.3
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 2.6e-36 159.8 115 71.3
HanXRQChr03g0075941 Helianthus annuus HOM05D004019 ORTHO05D005136 3.8e-35 156.0 105 74.3
AUR62038490 Chenopodium quinoa HOM05D004019 ORTHO05D005136 1.5e-28 134.0 117 67.5
PGR042G0250 Punica granatum HOM05D004019 ORTHO05D005136 1.6e-25 124.0 137 43.1
MD00G1060000 Malus domestica HOM05D004019 ORTHO05D005136 2.0e-23 117.1 102 67.6
MD08G1211900 Malus domestica HOM05D004019 ORTHO05D005136 2.0e-23 117.1 102 67.6
Solyc08g068030.1 Solanum lycopersicum HOM05D004019 ORTHO05D005136 1.7e-22 114.0 143 44.8
Prupe.5G099400 Prunus persica HOM05D004019 ORTHO05D005136 2.2e-22 113.6 98 59.2
Lsat_1_v5_gn_4_165520 Lactuca sativa HOM05D004019 ORTHO05D005136 5.0e-19 102.4 136 44.9
Oeu022768.1 Olea europaea HOM05D004019 ORTHO05D005136 5.5e-18 99.0 115 46.1
Medtr3g108370 Medicago truncatula HOM05D004019 ORTHO05D005136 6.1e-17 95.5 153 40.5
SHI11643 Sapria himalayana HOM05D004019 ORTHO05D035247 2.3e-16 93.6 102 52.0
Actinidia14324 Actinidia chinensis HOM05D004019 ORTHO05D005136 2.6e-15 90.1 130 49.2
Prupe.5G112400 Prunus persica HOM05D004019 ORTHO05D005136 1.7e-14 87.4 117 44.4
FvH4_2g30290 Fragaria vesca HOM05D004019 ORTHO05D035247 2.2e-14 87.0 88 53.4
FAN24G2522 Fragaria x ananassa HOM05D004019 ORTHO05D035247 2.2e-14 87.0 88 53.4
Haze_21651 Corylus avellana HOM05D004019 ORTHO05D005136 1.8e-13 84.0 97 52.6
Cc08_g08790 Coffea canephora HOM05D004019 ORTHO05D005136 9.1e-13 81.6 58 67.2
Cc00_g28950 Coffea canephora HOM05D004019 ORTHO05D005136 3.5e-12 79.7 58 69.0
TPR.G12424 Trifolium pratense HOM05D004019 ORTHO05D005136 5.9e-12 79.0 88 47.7
Medtr3g107940 Medicago truncatula HOM05D004019 ORTHO05D000015 1.7e-11 77.4 90 48.9
Actinidia31247 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.5e-10 74.3 74 62.2
FvH4_2g30421 Fragaria vesca HOM05D004019 ORTHO05D035788 1.5e-10 74.3 88 46.6
Actinidia36698 Actinidia chinensis HOM05D004019 ORTHO05D005136 7.2e-10 72.0 124 46.8
Medtr3g109982 Medicago truncatula HOM05D000051 ORTHO05D000015 6.8e-08 65.5 242 28.5
Actinidia23592 Actinidia chinensis HOM05D004019 ORTHO05D005136 5.7e-07 62.4 79 57.0
TPR.G26502 Trifolium pratense HOM05D000051 ORTHO05D000015 6.3e-06 58.9 144 34.0


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