Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 6.3e-264 913.7 505 100.0
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 3.6e-211 738.4 510 80.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.4e-207 726.5 507 75.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 9.3e-207 723.8 505 78.4
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.0e-205 720.3 503 79.1
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 3.6e-203 711.8 508 76.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.3e-200 703.4 512 73.0
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 4.9e-200 701.4 510 75.3
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 6.4e-200 701.0 512 75.8
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.1e-194 683.7 513 73.9
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.4e-194 682.6 510 73.9
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 1.5e-193 679.9 510 72.9
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 3.7e-187 658.7 488 73.8
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 2.7e-142 509.6 515 54.8
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.7e-142 509.6 515 54.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 5.2e-141 505.4 510 53.7
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 4.4e-140 502.3 512 52.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 8.3e-139 498.0 513 53.2
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 4.1e-138 495.7 512 52.9
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 7.0e-138 495.0 515 53.6
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 7.0e-138 495.0 515 53.6
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.0e-137 493.4 507 52.7
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.5e-137 492.7 510 53.9
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 3.5e-137 492.7 511 51.3
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 5.9e-137 491.9 513 49.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.3e-136 490.7 513 53.4
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.6e-134 483.8 513 52.4
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 3.0e-133 479.6 516 53.7
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.4e-132 475.7 522 54.4
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 6.3e-131 471.9 509 50.3
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 6.3e-131 471.9 503 48.1
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 4.1e-130 469.2 525 48.8
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 5.4e-130 468.8 514 54.5
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.2e-129 467.6 496 54.0
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.0e-129 466.8 511 49.7
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 7.7e-129 464.9 495 52.9
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 2.9e-128 463.0 506 48.6
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 6.6e-128 461.8 507 50.5
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.9e-127 460.3 510 48.8
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 7.3e-127 458.4 507 50.9
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 9.5e-127 458.0 506 48.2
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 9.5e-127 458.0 508 50.2
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 3.6e-126 456.1 512 47.1
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 8.0e-126 454.9 504 50.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 3.0e-125 453.0 512 50.6
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 8.9e-125 451.4 509 48.9
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.2e-124 451.1 511 47.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.5e-124 450.7 508 49.4
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 4.4e-124 449.1 504 49.2
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 5.7e-124 448.7 498 50.6
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 7.5e-124 448.4 417 54.4
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.7e-123 447.2 511 51.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.7e-123 446.0 508 47.8
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 4.9e-123 445.7 514 51.6
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 8.3e-123 444.9 510 47.8
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.1e-122 444.5 501 47.1
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.8e-122 443.7 508 49.8
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 7.0e-122 441.8 510 49.8
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.5e-121 439.5 497 50.5
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 3.9e-120 436.0 514 48.1
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.3e-119 433.0 508 47.4
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 4.3e-119 432.6 514 45.5
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.2e-118 431.0 505 51.3
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 2.1e-118 430.3 504 46.6
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 2.8e-118 429.9 531 45.0
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 4.7e-118 429.1 515 49.7
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 6.2e-118 428.7 494 47.8
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.8e-117 427.2 489 48.7
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 1.8e-117 427.2 503 50.3
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.2e-116 424.5 511 44.0
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.1e-114 417.9 512 47.1
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 5.4e-114 415.6 513 47.2
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.6e-113 414.1 491 48.3
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 8.6e-112 408.3 514 46.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.5e-111 406.8 491 47.3
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 7.3e-111 405.2 486 46.1
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 9.5e-111 404.8 488 47.1
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 9.5e-111 404.8 503 46.7
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.8e-110 403.3 494 45.1
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.8e-110 403.3 512 43.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 4.7e-110 402.5 515 48.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.4e-109 401.0 511 43.6
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 5.2e-109 399.1 495 45.1
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-108 396.0 488 46.7
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 2.9e-107 393.3 513 44.6
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 4.1e-106 389.4 392 53.8
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.2e-105 387.9 509 47.7
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.3e-104 383.6 496 45.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-103 380.9 505 46.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.9e-103 380.6 507 44.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.1e-102 377.1 345 53.0
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.8e-101 374.0 495 44.4
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 6.8e-101 372.1 412 49.8
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.8e-99 366.3 504 44.2
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.3e-96 357.1 489 42.3
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 5.6e-95 352.4 466 48.1
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 2.8e-94 350.1 516 40.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.8e-93 347.4 508 40.9
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.1e-89 334.0 332 51.5
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.6e-86 323.2 270 57.8
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.2e-76 291.6 379 42.0
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 7.4e-71 272.3 198 64.6
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 7.4e-71 272.3 198 64.6
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.2e-68 265.0 341 46.9
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 9.3e-66 255.4 526 34.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 7.9e-65 252.3 535 35.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 3.7e-62 243.4 331 45.9
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.4e-61 240.7 483 36.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.6e-60 237.3 219 54.8
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.1e-50 205.3 160 58.1
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.4e-42 178.3 521 26.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 5.9e-36 156.4 365 30.4
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 9.4e-26 122.5 193 43.0
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 7.5e-23 112.8 171 36.8
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 7.7e-20 102.8 142 38.0
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 3.8e-19 100.5 142 38.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.1e-18 99.0 114 49.1
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 6.1e-17 93.2 175 41.1
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.0e-16 92.4 114 44.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.0e-16 90.9 226 31.0
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 8.8e-16 89.4 114 42.1
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 7.3e-10 69.7 113 41.6
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 9.5e-10 69.3 122 38.5


User provided reference genes

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