Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 2.5e-110 402.1 202 100.0
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 2.1e-85 319.3 252 69.0
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 2.8e-82 308.9 252 67.1
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 3.7e-82 308.5 254 66.9
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 3.7e-82 308.5 250 68.0
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 4.8e-82 308.1 247 68.4
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 6.3e-82 307.8 257 67.3
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 8.3e-82 307.4 250 67.6
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 8.3e-82 307.4 257 66.9
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.3e-79 300.1 248 66.9
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 3.8e-79 298.5 250 66.4
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 1.4e-73 280.0 252 62.7
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 1.9e-65 253.1 242 58.3
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 4.1e-65 251.9 257 54.1
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 5.4e-65 251.5 242 56.6
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 1.3e-63 246.9 246 56.5
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 8.6e-63 244.2 238 58.4
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 8.6e-63 244.2 244 56.1
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 7.3e-62 241.1 259 52.1
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 9.5e-62 240.7 245 54.3
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 3.6e-61 238.8 238 57.6
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 6.2e-61 238.0 237 54.4
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 1.1e-60 237.3 243 53.9
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 2.3e-60 236.1 250 54.0
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 2.3e-60 236.1 262 50.8
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 1.2e-59 233.8 237 54.0
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 2.0e-59 233.0 246 50.8
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 4.4e-59 231.9 235 55.7
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 7.5e-59 231.1 274 49.6
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 2.9e-58 229.2 245 53.1
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 4.9e-58 228.4 250 52.0
Cpa.g.sc34.183 Carica papaya HOM05D002956 ORTHO05D008031 6.4e-58 228.0 244 53.7
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 1.9e-57 226.5 237 52.7
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 5.4e-57 224.9 245 51.8
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 7.1e-57 224.6 236 53.8
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 1.2e-56 223.8 253 50.6
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 4.6e-56 221.9 230 53.0
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 7.8e-56 221.1 264 48.9
VMungo1080G1429 Vigna mungo HOM05D002956 ORTHO05D008031 7.8e-56 221.1 242 52.1
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 1.7e-55 219.9 267 48.3
Nitab4.5_0004018g0060 Nicotiana tabacum HOM05D002956 ORTHO05D008031 2.3e-55 219.5 200 57.0
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 3.9e-55 218.8 268 47.4
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 5.1e-55 218.4 269 48.0
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 1.5e-54 216.9 238 50.8
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 4.3e-54 215.3 237 50.6
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 7.3e-54 214.5 246 51.6
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 1.2e-53 213.8 233 51.9
PGSC0003DMG400031243 Solanum tuberosum HOM05D002956 ORTHO05D008031 2.8e-53 212.6 234 51.7
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 4.7e-53 211.8 259 48.3
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 1.4e-52 210.3 242 50.4
ECA233G6038 Erigeron canadensis HOM05D002956 ORTHO05D008031 5.8e-51 204.9 266 46.2
Nitab4.5_0007012g0050 Nicotiana tabacum HOM05D002956 ORTHO05D008031 2.2e-50 203.0 233 49.4
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.9e-50 202.6 244 48.4
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 3.7e-50 202.2 250 47.2
COL.COLO4_07384 Corchorus olitorius HOM05D002956 ORTHO05D008031 3.2e-49 199.1 228 49.1
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 1.7e-47 193.4 233 48.5
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 2.5e-46 189.5 199 55.8
HanXRQChr12g0380421 Helianthus annuus HOM05D002956 ORTHO05D008031 2.5e-46 189.5 290 41.0
Ca_25980_v3 Cicer arietinum L. HOM05D002956 ORTHO05D008031 6.2e-45 184.9 250 45.2
Carub.0004s0727 Capsella rubella HOM05D002956 ORTHO05D008031 1.4e-44 183.7 178 60.7
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 3.1e-44 182.6 294 38.1
AT2G26810 Arabidopsis thaliana HOM05D002956 ORTHO05D008031 6.8e-44 181.4 203 55.7
Psat5g191880 Pisum sativum HOM05D002956 ORTHO05D008031 1.7e-42 176.8 209 47.8
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.7e-42 176.8 242 43.0
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 1.2e-40 170.6 292 39.7
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 2.1e-40 169.9 203 47.3
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 2.7e-40 169.5 390 32.8
SGA_v2.0_scaffold26G11398 Striga asiatica HOM05D002956 ORTHO05D008031 7.8e-40 167.9 251 43.0
EL10Ac4g10091 Beta vulgaris HOM05D002956 ORTHO05D008031 4.8e-37 158.7 153 54.2
AUR62000217 Chenopodium quinoa HOM05D002956 ORTHO05D008031 8.1e-37 157.9 243 40.7
Solyc11g065040.2 Solanum lycopersicum HOM05D002956 ORTHO05D008031 8.1e-37 157.9 182 48.9
Peaxi162Scf00004g04220 Petunia axillaris HOM05D002956 ORTHO05D008031 2.6e-35 152.9 180 48.3
TAR369G0726 Trochodendron aralioides HOM05D002956 ORTHO05D008031 7.6e-35 151.4 162 51.2
Thecc.09G246000 Theobroma cacao HOM05D002956 ORTHO05D008031 9.9e-35 151.0 161 52.8
Sopen11g024800 Solanum pennellii HOM05D002956 ORTHO05D008031 1.7e-34 150.2 162 52.5
Gorai.001G135400 Gossypium raimondii HOM05D002956 ORTHO05D008031 6.4e-34 148.3 166 52.4
Medtr3g045720 Medicago truncatula HOM05D002956 ORTHO05D008031 6.4e-34 148.3 173 48.6
vmacro04047 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 3.2e-33 146.0 139 57.6
GSVIVG01037341001 Vitis vinifera HOM05D002956 ORTHO05D008031 3.2e-33 146.0 166 51.8
Sc06g0004740 Simmondsia chinensis HOM05D002956 ORTHO05D008031 2.1e-32 143.3 161 50.3
AUR62006562 Chenopodium quinoa HOM05D002956 ORTHO05D008031 2.7e-32 142.9 307 35.2
FAN11G2127 Fragaria x ananassa HOM05D002956 ORTHO05D008031 4.6e-32 142.1 175 49.1
MSTRG.12436 Avicennia marina HOM05D002956 ORTHO05D008031 1.0e-31 141.0 162 50.6
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 3.0e-31 139.4 237 37.6
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 5.1e-31 138.7 228 37.7
Oeu061696.1 Olea europaea HOM05D002956 ORTHO05D008031 8.7e-31 137.9 194 44.3
Carub.0004s0726 Capsella rubella HOM05D002956 ORTHO05D008031 1.5e-30 137.1 75 89.3
MD00G1134600 Malus domestica HOM05D002956 ORTHO05D008031 4.3e-30 135.6 154 49.4
RcHm_v2.0_Chr5g0050251 Rosa chinensis HOM05D002956 ORTHO05D008031 2.9e-26 122.9 83 74.7
unitig_22.g6189 Utricularia gibba HOM05D002956 ORTHO05D008031 3.8e-26 122.5 190 39.5
Atru.chr3.3008 Acer truncatum HOM05D002956 ORTHO05D008031 5.4e-25 118.6 80 72.5
Lj2C795T0 Lonicera japonica HOM05D002956 ORTHO05D008031 5.4e-25 118.6 158 44.3
FAN21G3062 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.1e-24 116.7 92 65.2
MELO3C014548.2 Cucumis melo HOM05D002956 ORTHO05D008031 2.7e-24 116.3 83 67.5
Ah.06g194770 Amaranthus hybridus HOM05D002956 ORTHO05D008031 5.1e-23 112.1 130 48.5
CsaV3_6G038830 Cucumis sativus L. HOM05D002956 ORTHO05D008031 4.3e-22 109.0 81 70.4
Migut.N02382 Erythranthe guttata HOM05D002956 ORTHO05D008031 4.3e-22 109.0 83 68.7
Zm00001eb329010 Zea mays HOM05D002956 ORTHO05D008031 2.1e-21 106.7 144 43.1
vmacro04048 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 8.1e-21 104.8 90 63.3
HPP92_001025 Vanilla planifolia HOM05D002956 ORTHO05D008031 8.1e-21 104.8 77 64.9
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 1.5e-19 100.5 151 43.7
GSVIVG01037340001 Vitis vinifera HOM05D002956 ORTHO05D008031 1.7e-18 97.1 75 65.3
Psat4g060320 Pisum sativum HOM05D002956 ORTHO05D008031 2.5e-17 93.2 104 51.0
FAN25G3179 Fragaria x ananassa HOM05D002956 ORTHO05D008031 3.2e-17 92.8 155 39.4
AagrBONN_evm.TU.Sc2ySwM_228.3973 Anthoceros agrestis HOM05D002956 ORTHO05D008031 1.6e-16 90.5 163 36.2
FAN25G0087 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.1e-16 90.1 182 33.5
CAN.G468.2 Capsicum annuum HOM05D002956 ORTHO05D008031 4.6e-16 89.0 115 44.3
SEGI_15484 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.0e-15 87.8 83 53.0
SMO270G0089 Selaginella moellendorffii HOM05D055329 ORTHO05D008031 4.3e-14 82.4 99 46.5
CBR_g39846 Chara braunii HOM05D002956 ORTHO05D008031 4.8e-13 79.0 115 38.3
Psat0s4720g0080 Pisum sativum HOM05D002956 ORTHO05D008031 2.1e-08 63.5 64 57.8
Pp3c6_1170 Physcomitrium patens HOM05D002956 ORTHO05D008031 2.7e-08 63.2 73 46.6
Psat2g099480 Pisum sativum HOM05D002956 ORTHO05D008031 6.1e-08 62.0 122 36.1
MELO3C020642.2 Cucumis melo HOM05D002956 ORTHO05D008031 1.0e-07 61.2 56 53.6
Dinv04583 Davidia involucrata HOM05D002956 ORTHO05D008031 1.8e-07 60.5 35 80.0
Peaxi162Scf00080g00812 Petunia axillaris HOM05D002956 ORTHO05D008031 6.7e-07 58.5 96 38.5
CAN.G1049.9 Capsicum annuum HOM05D002956 ORTHO05D008031 2.5e-06 56.6 53 58.5
RcHm_v2.0_Chr5g0050231 Rosa chinensis HOM05D002956 ORTHO05D008031 4.3e-06 55.8 40 60.0
Zm00001eb110260 Zea mays HOM05D002956 ORTHO05D008031 9.7e-06 54.7 123 35.8


User provided reference genes

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