Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 2.2e-126 455.7 231 100.0
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 5.7e-111 404.4 228 89.5
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 1.4e-109 399.8 228 88.2
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 2.6e-108 395.6 228 88.2
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 7.7e-108 394.0 228 86.4
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 2.2e-107 392.5 228 86.4
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 5.0e-107 391.3 228 85.5
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 6.5e-107 391.0 228 85.5
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 6.5e-107 391.0 228 85.5
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 8.5e-107 390.6 228 85.1
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.4e-106 389.8 228 85.5
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 1.9e-106 389.4 228 85.5
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 7.2e-106 387.5 226 86.7
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.3e-104 382.5 228 84.2
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.6e-97 359.8 228 81.1
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 2.7e-97 359.0 233 79.8
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 1.4e-93 346.7 229 73.8
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 2.4e-93 345.9 204 86.3
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 7.7e-92 340.9 228 73.2
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 2.9e-91 339.0 229 72.9
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 5.0e-91 338.2 223 75.3
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 1.1e-90 337.0 229 72.5
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 2.5e-90 335.9 228 71.1
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 5.5e-90 334.7 229 69.4
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 9.4e-90 334.0 227 71.8
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 1.2e-89 333.6 227 71.4
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 1.6e-89 333.2 227 72.7
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 2.7e-89 332.4 228 70.6
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 2.7e-89 332.4 229 71.2
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 3.6e-89 332.0 228 71.1
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 3.6e-89 332.0 227 72.7
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 3.6e-89 332.0 229 69.0
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 3.6e-89 332.0 227 72.2
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 3.6e-89 332.0 227 71.8
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 1.4e-88 330.1 225 72.0
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 1.4e-88 330.1 229 72.1
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 1.8e-88 329.7 229 70.7
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 2.3e-88 329.3 228 70.2
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 2.3e-88 329.3 229 68.6
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.3e-88 329.3 227 70.5
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 3.0e-88 328.9 231 69.7
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 4.0e-88 328.6 228 70.6
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 4.0e-88 328.6 228 70.2
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 4.0e-88 328.6 228 71.5
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 5.2e-88 328.2 228 70.2
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 8.8e-88 327.4 228 70.6
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.5e-87 326.6 228 70.2
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 1.5e-87 326.6 230 70.4
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.5e-87 326.6 229 70.7
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 2.0e-87 326.2 229 67.7
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 2.0e-87 326.2 228 68.4
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 2.6e-87 325.9 228 68.9
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 2.6e-87 325.9 225 71.1
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.6e-87 325.9 227 70.0
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 3.4e-87 325.5 229 66.4
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 3.4e-87 325.5 222 71.6
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 4.4e-87 325.1 229 68.6
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 7.5e-87 324.3 228 70.2
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 9.8e-87 323.9 225 71.6
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 9.8e-87 323.9 230 68.7
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 1.7e-86 323.2 228 69.7
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 2.2e-86 322.8 229 67.7
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 2.2e-86 322.8 228 69.3
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 2.2e-86 322.8 223 71.3
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 2.8e-86 322.4 230 68.3
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 3.7e-86 322.0 228 69.7
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 3.7e-86 322.0 231 67.5
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 3.7e-86 322.0 227 68.3
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 3.7e-86 322.0 228 69.3
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 4.8e-86 321.6 227 69.2
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 4.8e-86 321.6 229 67.2
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 6.3e-86 321.2 228 68.9
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 6.3e-86 321.2 228 69.7
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 8.3e-86 320.9 222 71.6
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 1.1e-85 320.5 229 66.8
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 1.4e-85 320.1 227 69.6
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 1.4e-85 320.1 224 69.2
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 1.4e-85 320.1 225 69.8
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.8e-85 319.7 228 69.3
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 2.4e-85 319.3 229 69.4
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 2.4e-85 319.3 228 69.3
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 4.1e-85 318.5 224 70.1
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 5.4e-85 318.2 228 69.3
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 9.1e-85 317.4 229 68.1
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 1.2e-84 317.0 222 70.7
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 1.2e-84 317.0 229 67.2
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 1.6e-84 316.6 228 67.5
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 1.6e-84 316.6 229 68.1
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 1.6e-84 316.6 227 68.7
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 2.0e-84 316.2 225 69.8
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 2.0e-84 316.2 229 69.0
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 2.7e-84 315.8 227 70.5
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 4.5e-84 315.1 228 69.3
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 7.7e-84 314.3 227 69.6
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 7.7e-84 314.3 258 63.2
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 1.0e-83 313.9 215 71.6
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 1.0e-83 313.9 224 67.4
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 1.3e-83 313.5 229 69.4
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 1.3e-83 313.5 209 72.2
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 1.7e-83 313.2 238 71.4
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 1.7e-83 313.2 229 67.2
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 6.5e-83 311.2 225 66.2
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 6.5e-83 311.2 229 65.9
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.1e-82 310.5 226 68.6
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 1.5e-82 310.1 229 68.6
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.9e-82 309.7 227 67.4
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.9e-82 309.7 228 68.0
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 4.2e-82 308.5 228 67.5
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 1.2e-81 307.0 228 67.1
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 1.2e-81 307.0 228 67.1
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 1.6e-81 306.6 227 67.4
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 2.1e-81 306.2 229 65.1
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 6.1e-81 304.7 228 65.4
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 6.1e-81 304.7 228 66.2
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.4e-79 298.9 201 73.1
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 3.7e-78 295.4 229 63.3
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 1.8e-77 293.1 224 65.2
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 2.0e-76 289.7 310 50.6
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 1.5e-74 283.5 221 64.3
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 2.5e-74 282.7 193 71.5
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 5.6e-74 281.6 210 65.7
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 6.1e-73 278.1 228 62.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 6.1e-73 278.1 192 70.8
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 2.3e-72 276.2 223 63.7
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 2.2e-70 269.6 218 61.5
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.4e-69 266.9 220 61.8
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 1.9e-69 266.5 231 61.0
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 2.3e-67 259.6 192 64.6
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 1.9e-61 240.0 222 55.4
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 1.6e-60 236.9 182 65.4
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 3.9e-59 232.3 176 66.5
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 2.5e-58 229.6 231 51.9
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 2.8e-57 226.1 152 73.0
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 4.7e-57 225.3 222 51.8
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 1.1e-56 224.2 221 52.9
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 1.5e-55 220.3 140 78.6
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 1.4e-53 213.8 213 54.0
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 2.1e-52 209.9 133 78.2
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.7e-52 209.5 144 72.2
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 3.9e-51 205.7 172 61.0
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 6.6e-51 204.9 134 77.6
FAN20G0831 Fragaria x ananassa HOM05D003866 ORTHO05D004508 3.4e-47 192.6 124 76.6
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 2.7e-44 183.0 144 64.6
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 3.5e-44 182.6 146 61.0
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 2.3e-43 179.9 202 48.0
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 4.7e-41 172.2 144 59.0
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 8.1e-41 171.4 135 60.7
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 1.1e-37 161.0 119 65.5
BolC4t23901H Brassica oleracea HOM05D003866 ORTHO05D004508 1.9e-37 160.2 108 78.7
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 2.7e-36 156.4 146 56.2
BraA07t29544Z Brassica rapa HOM05D003866 ORTHO05D004508 6.0e-36 155.2 100 82.0
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 2.5e-34 149.8 194 42.8
BcaC02g10888 Brassica carinata HOM05D003866 ORTHO05D004508 2.8e-33 146.4 82 91.5
Oeu047454.1 Olea europaea HOM05D003866 ORTHO05D004508 1.4e-32 144.1 98 73.5
C04p24060 Brassica napus HOM05D003866 ORTHO05D004508 6.9e-32 141.7 95 80.0
RcHm_v2.0_Chr4g0419041 Rosa chinensis HOM05D003866 ORTHO05D004508 1.2e-31 141.0 125 60.0
HPP92_010697 Vanilla planifolia HOM05D001483 ORTHO05D001463 2.6e-31 139.8 183 45.4
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 1.3e-30 137.5 142 50.0
QL12p026964 Quercus lobata HOM05D003866 ORTHO05D004508 6.4e-30 135.2 85 75.3
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 6.0e-28 128.6 104 58.7
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 3.0e-27 126.3 96 66.7
CAN.G174.11 Capsicum annuum HOM05D003866 ORTHO05D004508 5.1e-27 125.6 85 74.1
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 1.5e-26 124.0 88 68.2
ClCG10G010800 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.3e-25 120.9 85 69.4
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 1.6e-25 120.6 85 67.1
CAN.G255.6 Capsicum annuum HOM05D003866 ORTHO05D004508 6.9e-24 115.2 75 77.3
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 7.6e-23 111.7 74 71.6
FvH4_3g05410 Fragaria vesca HOM05D003866 ORTHO05D004508 8.4e-22 108.2 76 69.7
FAN06G0461 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.9e-21 107.1 85 63.5
SEGI_13628 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 7.1e-21 105.1 85 61.2
PRCOL_00003268 Prasinoderma coloniale HOM05D003001 ORTHO05D003494 9.3e-21 104.8 187 33.7
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 1.6e-20 104.0 96 57.3
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 8.7e-19 98.2 121 47.1
MCO11G607 Micromonas commoda HOM05D003866 ORTHO05D004508 3.3e-18 96.3 219 31.1
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 1.3e-17 94.4 61 72.1
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 2.8e-17 93.2 111 50.5
Cre13.g586250 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 1.4e-16 90.9 187 32.6
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 6.5e-14 82.0 51 74.5
RcHm_v2.0_Chr4g0419031 Rosa chinensis HOM05D003866 ORTHO05D004508 3.2e-13 79.7 85 50.6
ClCG10G010610 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.3e-11 74.3 61 57.4
HanXRQChr04g0118191 Helianthus annuus HOM05D003866 ORTHO05D004508 8.7e-11 71.6 67 56.7
RcHm_v2.0_Chr1g0333451 Rosa chinensis HOM05D003866 ORTHO05D004508 5.7e-10 68.9 60 56.7
SHI02445 Sapria himalayana HOM05D003866 ORTHO05D004508 7.4e-10 68.6 49 69.4


User provided reference genes

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