Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 6.7e-94 347.4 187 100.0
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 4.5e-74 281.6 200 81.5
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.2e-71 273.5 200 78.5
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 3.6e-71 271.9 195 79.0
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 3.6e-71 271.9 195 79.0
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 8.8e-70 267.3 197 78.2
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 2.0e-69 266.2 196 78.6
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 2.6e-69 265.8 195 80.0
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-69 263.8 190 79.5
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.7e-68 261.9 193 78.2
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 8.2e-68 260.8 194 77.8
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.4e-67 260.0 198 76.3
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.4e-67 260.0 193 77.7
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.4e-67 260.0 193 77.7
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.5e-66 256.5 198 77.3
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.1e-63 246.1 184 77.2
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 2.7e-63 245.7 189 73.0
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 3.7e-60 235.3 197 72.1
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.2e-58 230.3 185 70.8
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 3.5e-58 228.8 178 71.9
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 4.5e-58 228.4 198 68.2
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.5e-58 228.4 198 68.2
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.0e-57 227.3 202 66.8
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-57 226.5 197 68.0
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 3.8e-57 225.3 185 71.9
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.0e-57 224.9 198 67.2
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 5.0e-57 224.9 196 66.3
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.1e-56 223.8 199 66.8
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.5e-56 223.4 179 70.9
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.5e-56 222.6 175 69.7
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.5e-56 222.6 175 69.7
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 2.5e-56 222.6 187 67.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.2e-56 222.2 199 66.8
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 3.2e-56 222.2 167 76.0
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 4.2e-56 221.9 166 74.1
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 5.5e-56 221.5 187 66.3
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 7.2e-56 221.1 194 67.0
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 7.2e-56 221.1 179 69.3
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 9.4e-56 220.7 190 66.3
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.6e-55 219.9 176 71.6
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.6e-55 219.9 181 69.1
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.1e-55 219.5 181 69.1
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 2.7e-55 219.2 162 76.5
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 4.7e-55 218.4 171 69.6
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 8.0e-55 217.6 170 68.2
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.0e-54 217.2 186 67.2
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 1.4e-54 216.9 167 73.1
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.4e-54 216.9 192 66.7
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.4e-54 216.9 188 66.5
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.4e-54 216.9 190 66.8
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.8e-54 216.5 159 74.8
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 2.3e-54 216.1 193 65.3
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 3.0e-54 215.7 191 64.9
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 5.2e-54 214.9 166 70.5
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 5.2e-54 214.9 162 75.3
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.8e-54 214.5 164 72.0
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 6.8e-54 214.5 164 72.0
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 6.8e-54 214.5 193 65.3
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 6.8e-54 214.5 191 67.0
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 6.8e-54 214.5 162 74.7
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.2e-53 213.8 175 69.1
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.2e-53 213.8 173 68.2
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.2e-53 213.8 177 68.9
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.5e-53 213.4 177 68.9
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.0e-53 213.0 191 62.8
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 2.0e-53 213.0 195 65.6
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 3.4e-53 212.2 148 79.1
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.4e-53 211.8 164 71.3
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 5.7e-53 211.5 173 69.4
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 7.5e-53 211.1 188 63.8
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 9.8e-53 210.7 182 64.8
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 9.8e-53 210.7 196 62.8
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 9.8e-53 210.7 181 67.4
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.7e-52 209.9 186 66.1
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 3.7e-52 208.8 176 66.5
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 3.7e-52 208.8 163 72.4
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.8e-52 208.4 174 67.2
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 4.8e-52 208.4 172 68.0
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 6.3e-52 208.0 188 66.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 6.3e-52 208.0 179 67.0
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.1e-51 207.2 191 62.3
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.1e-51 207.2 190 61.1
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.4e-51 206.8 190 63.7
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.8e-51 206.5 188 64.9
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 2.4e-51 206.1 193 62.2
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 2.4e-51 206.1 191 61.8
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 7.0e-51 204.5 192 63.0
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 7.0e-51 204.5 191 62.3
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 9.1e-51 204.1 159 71.1
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.2e-50 203.8 175 68.0
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.2e-50 203.8 198 62.1
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.6e-50 203.4 173 67.6
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.0e-50 203.0 158 73.4
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 2.0e-50 203.0 198 63.1
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 5.9e-50 201.4 151 73.5
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.2e-49 199.5 132 81.1
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 3.8e-49 198.7 198 60.1
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 8.5e-49 197.6 190 63.7
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.1e-48 197.2 190 63.7
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.5e-48 196.1 157 70.7
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 8.0e-47 191.0 141 75.2
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 1.0e-46 190.7 163 63.8
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 2.0e-45 186.4 152 74.3
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.3e-44 183.7 146 63.0
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 8.3e-44 181.0 165 66.7
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 1.8e-43 179.9 148 66.2
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 2.7e-42 176.0 188 59.0
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 3.5e-42 175.6 192 57.8
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 3.5e-42 175.6 124 73.4
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 1.7e-41 173.3 117 82.1
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.3e-41 172.9 136 66.9
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 6.6e-41 171.4 129 71.3
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 4.7e-39 165.2 120 75.0
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 4.7e-39 165.2 117 77.8
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 2.0e-37 159.8 108 77.8
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 2.2e-36 156.4 180 51.1
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.4e-35 152.9 130 60.0
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.9e-33 145.6 142 57.7
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 8.6e-33 144.4 133 62.4
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 7.3e-32 141.4 104 78.8
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 5.2e-30 135.2 87 82.8
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 8.9e-30 134.4 91 80.2
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.0e-29 133.3 87 81.6
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 1.1e-27 127.5 96 78.1
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.8e-23 112.8 92 68.5
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.0e-21 106.7 133 53.4
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 7.5e-21 104.8 112 57.1
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.0e-17 92.8 195 37.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 8.1e-07 58.2 105 35.2


User provided reference genes

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