Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 3.3e-40 167.9 86 100.0
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.9e-35 152.1 86 89.5
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 8.0e-34 146.7 86 84.9
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 8.0e-34 146.7 86 87.2
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 8.8e-33 143.3 86 82.6
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 5.7e-32 140.6 86 81.4
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 5.7e-32 140.6 86 81.4
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 7.4e-32 140.2 87 83.9
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.2e-31 138.7 86 80.2
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 2.2e-31 138.7 86 81.4
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.2e-31 138.7 86 80.2
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 2.8e-31 138.3 86 80.2
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 1.4e-30 136.0 87 80.5
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 2.9e-28 128.3 82 78.0
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 6.5e-28 127.1 82 76.8
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.5e-27 125.9 86 76.7
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.5e-27 125.9 85 80.0
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 9.4e-27 123.2 86 72.1
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.6e-26 122.5 86 73.3
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.0e-25 119.8 86 72.1
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.4e-25 119.4 86 73.3
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 4.0e-25 117.9 86 69.8
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 65.1
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 7.5e-24 113.6 86 65.1
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 7.5e-24 113.6 80 72.5
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 2.8e-23 111.7 86 68.6
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 2.8e-23 111.7 86 66.3
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 8.3e-23 110.2 86 68.6
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 68.6
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 62.8
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 67.4
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 64.0
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 68.6
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 68.6
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 68.6
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 7.0e-22 107.1 84 64.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 62.8
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 3.5e-21 104.8 86 65.1
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 61.6
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 62.8
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-20 102.8 86 60.5
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.3e-20 102.8 86 60.5
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 1.3e-20 102.8 86 66.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 3.8e-20 101.3 86 65.1
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 3.8e-20 101.3 85 64.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 5.0e-20 100.9 84 63.1
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.1e-19 99.8 84 61.9
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 65.1
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 66.3
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 59.8
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 59.8
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 59.8
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 59.8
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 59.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 60.5
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 62.8
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 65.1
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 4.2e-19 97.8 82 63.4
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 60.5
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 64.0
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 61.6
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 62.8
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.6e-18 95.9 79 59.5
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 61.6
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 2.1e-18 95.5 86 61.6
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.7e-18 95.1 83 62.7
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 2.7e-18 95.1 86 62.8
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 3.6e-18 94.7 91 61.5
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 3.6e-18 94.7 87 57.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 3.6e-18 94.7 86 59.3
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-18 94.4 87 57.5
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 4.7e-18 94.4 75 65.3
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 59.3
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 3.0e-17 91.7 86 57.0
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.2e-17 90.9 86 54.7
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.2e-17 90.9 86 57.0
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 6.8e-17 90.5 88 58.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 8.8e-17 90.1 86 57.0
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.6e-16 88.6 88 56.8
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 4.4e-16 87.8 86 57.0
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 7.5e-16 87.0 86 53.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.3e-15 86.3 86 54.7
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.7e-15 85.9 83 55.4
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.7e-15 85.9 86 52.3
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.7e-15 85.9 86 52.3
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.7e-15 84.7 86 53.5
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 3.7e-15 84.7 88 53.4
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 4.8e-15 84.3 85 54.1
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.3e-15 84.0 86 53.5
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.4e-14 82.0 85 48.2
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 2.4e-14 82.0 86 55.8
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 4.1e-14 81.3 81 59.3
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.2e-13 79.7 86 50.0
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 2.0e-13 79.0 43 83.7
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-13 79.0 79 50.6
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 5.9e-13 77.4 74 54.1
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 2.5e-11 72.0 85 49.4
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 4.2e-11 71.2 83 48.2
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 7.2e-11 70.5 87 50.6
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 3.6e-10 68.2 66 47.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 6.1e-10 67.4 87 49.4
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 2.3e-09 65.5 86 45.3
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 4.0e-09 64.7 89 44.9
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 4.4e-08 61.2 174 29.3
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 2.8e-07 58.5 66 47.0
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 8.3e-07 57.0 65 47.7
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 8.3e-07 57.0 86 43.0
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 5.4e-06 54.3 43 62.8
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 7.0e-06 53.9 40 70.0


User provided reference genes

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