Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G7250 Aethionema arabicum HOM05D000106 ORTHO05D059663 2.6e-39 164.9 80 100.0
Aa31LG5G7230 Aethionema arabicum HOM05D000106 ORTHO05D000160 3.8e-14 81.3 50 80.0
Thhalv10012629m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 3.1e-08 61.6 50 58.0
Carub.0005s1221 Capsella rubella HOM05D000106 ORTHO05D000160 5.9e-07 57.4 50 58.0
CARHR122160 Cardamine hirsuta HOM05D000106 ORTHO05D000160 5.9e-07 57.4 69 46.4
BcaB06g28338 Brassica carinata HOM05D000106 ORTHO05D000160 7.7e-07 57.0 51 58.8
BcaB02g10222 Brassica carinata HOM05D000106 ORTHO05D000160 1.7e-06 55.8 50 52.0
Thhalv10016220m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 2.2e-06 55.5 68 45.6
AT1G07560 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.9e-06 55.1 50 58.0
THA.LOC104800666 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 2.9e-06 55.1 50 52.0
AL1G17740 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 56.0
BcaC07g42484 Brassica carinata HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 54.0
C03p13410 Brassica napus HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 54.0
BolC3t13799H Brassica oleracea HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 54.0
Thhalv10006786m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 56.0
Thhalv10016229m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 3.8e-06 54.7 50 52.0
Carub.0004s0998 Capsella rubella HOM05D000106 ORTHO05D000160 5.0e-06 54.3 50 56.0
Sp5g15280 Schrenkiella parvula HOM05D000106 ORTHO05D000160 5.0e-06 54.3 49 55.1
AT3G46400 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 6.5e-06 53.9 50 54.0
CARHR007350 Cardamine hirsuta HOM05D000106 ORTHO05D000160 6.5e-06 53.9 50 56.0
AT2G28990 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 8.5e-06 53.5 48 52.1
Thhalv10017541m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 8.5e-06 53.5 50 58.0
THA.LOC104815786 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 8.5e-06 53.5 50 56.0


User provided reference genes

Program Settings