Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G6310 Aethionema arabicum HOM05D004600 ORTHO05D005471 2.4e-41 172.2 115 100.0
SpUn0968_0010 Schrenkiella parvula HOM05D004600 ORTHO05D005471 7.1e-38 160.6 115 75.7
AT2G30410 Arabidopsis thaliana HOM05D004600 ORTHO05D005471 7.9e-37 157.1 115 75.7
CARHR123850 Cardamine hirsuta HOM05D004600 ORTHO05D005471 2.3e-36 155.6 113 75.2
Carub.0004s0600 Capsella rubella HOM05D004600 ORTHO05D005471 3.0e-36 155.2 114 75.4
Carub.0004s1157 Capsella rubella HOM05D004600 ORTHO05D005471 5.1e-36 154.5 115 73.9
AL136U10020 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 8.7e-36 153.7 115 74.8
AL4G25280 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 8.7e-36 153.7 115 74.8
A05p15020 Brassica napus HOM05D004600 ORTHO05D005471 1.1e-35 153.3 115 73.9
BolC4t23549H Brassica oleracea HOM05D004600 ORTHO05D005471 1.1e-35 153.3 115 73.9
BraA05t20428Z Brassica rapa HOM05D004600 ORTHO05D005471 1.1e-35 153.3 115 73.9
THA.LOC104805733 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 1.1e-35 153.3 115 73.0
C04p20100 Brassica napus HOM05D004600 ORTHO05D005471 2.5e-35 152.1 115 73.0
BcaC02g11135 Brassica carinata HOM05D004600 ORTHO05D005471 5.6e-35 151.0 115 73.0
Thhalv10017954m.g Eutrema salsugineum HOM05D004600 ORTHO05D005471 5.6e-35 151.0 115 72.2
BcaB02g10324 Brassica carinata HOM05D004600 ORTHO05D005471 1.6e-34 149.4 115 73.0
THA.LOC104821611 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 3.7e-34 148.3 115 70.4
EL10Ac2g03665 Beta vulgaris HOM05D004600 ORTHO05D005471 8.1e-34 147.1 115 69.6
TPR.G31719 Trifolium pratense HOM05D004600 ORTHO05D005471 8.1e-34 147.1 115 67.8
Eucgr.E01748 Eucalyptus grandis HOM05D004600 ORTHO05D005471 4.0e-33 144.8 115 67.0
Ca_06414_v3 Cicer arietinum L. HOM05D004600 ORTHO05D005471 5.3e-33 144.4 111 68.5
BcaB01g04106 Brassica carinata HOM05D004600 ORTHO05D005471 6.9e-33 144.1 115 70.4
Ciclev10033122m.g Citrus clementina HOM05D004600 ORTHO05D005471 6.9e-33 144.1 115 67.0
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 9.0e-33 143.7 78 92.3
Hund03244 Selenicereus undatus HOM05D004600 ORTHO05D005471 9.0e-33 143.7 115 67.0
Atru.chr2.1648 Acer truncatum HOM05D004600 ORTHO05D005471 1.2e-32 143.3 77 93.5
ECA234G0066 Erigeron canadensis HOM05D004600 ORTHO05D005471 1.2e-32 143.3 113 69.0
HanXRQChr17g0540501 Helianthus annuus HOM05D004600 ORTHO05D005471 1.2e-32 143.3 113 69.0
Thecc.05G234100 Theobroma cacao HOM05D004600 ORTHO05D005471 1.2e-32 143.3 77 94.8
Gohir.D11G317800 Gossypium hirsutum HOM05D004600 ORTHO05D005471 1.5e-32 142.9 78 91.0
Gorai.007G347600 Gossypium raimondii HOM05D004600 ORTHO05D005471 1.5e-32 142.9 78 91.0
Nitab4.5_0006200g0020 Nicotiana tabacum HOM05D004600 ORTHO05D005471 1.5e-32 142.9 115 68.7
Duzib177G1065 Durio zibethinus HOM05D004600 ORTHO05D005471 2.0e-32 142.5 77 93.5
Solyc01g068400.3 Solanum lycopersicum HOM05D004600 ORTHO05D005471 2.0e-32 142.5 115 67.0
Sopen01g030360 Solanum pennellii HOM05D004600 ORTHO05D005471 2.0e-32 142.5 115 67.0
CSS0000756 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 2.6e-32 142.1 115 67.0
FvH4_7g07840 Fragaria vesca HOM05D004600 ORTHO05D005471 2.6e-32 142.1 115 64.3
FvH4_7g08250 Fragaria vesca HOM05D004600 ORTHO05D005471 2.6e-32 142.1 115 64.3
FAN01G2185 Fragaria x ananassa HOM05D004600 ORTHO05D005471 2.6e-32 142.1 115 64.3
FAN06G4779 Fragaria x ananassa HOM05D004600 ORTHO05D005471 2.6e-32 142.1 115 64.3
Lsat_1_v5_gn_3_31540 Lactuca sativa HOM05D004600 ORTHO05D005471 2.6e-32 142.1 113 68.1
Medtr5g094290 Medicago truncatula HOM05D004600 ORTHO05D005471 2.6e-32 142.1 111 66.7
arahy.Tifrunner.gnm1.ann1.FL4BP3 Arachis hypogaea HOM05D004600 ORTHO05D005471 3.4e-32 141.7 77 93.5
Lalb_Chr10g0107261 Lupinus albus HOM05D004600 ORTHO05D005471 3.4e-32 141.7 77 92.2
Manes.08G156800 Manihot esculenta HOM05D004600 ORTHO05D005471 4.5e-32 141.4 77 92.2
GSVIVG01018312001 Vitis vinifera HOM05D004600 ORTHO05D005471 4.5e-32 141.4 77 92.2
Duzib106G0868 Durio zibethinus HOM05D004600 ORTHO05D005471 5.8e-32 141.0 77 93.5
MD07G1080900 Malus domestica HOM05D004600 ORTHO05D005471 5.8e-32 141.0 77 92.2
QL02p099100 Quercus lobata HOM05D004600 ORTHO05D005471 5.8e-32 141.0 77 92.2
PGSC0003DMG400017954 Solanum tuberosum HOM05D004600 ORTHO05D005471 5.8e-32 141.0 115 66.1
Actinidia30941 Actinidia chinensis HOM05D004600 ORTHO05D005471 1.0e-31 140.2 77 93.5
arahy.Tifrunner.gnm1.ann1.8V97K8 Arachis hypogaea HOM05D004600 ORTHO05D005471 1.0e-31 140.2 77 92.2
CiPaw.11G057300 Carya illinoinensis HOM05D004600 ORTHO05D005471 1.0e-31 140.2 115 65.2
Hma1.2p1_2581F.1_g324750 Hydrangea macrophylla HOM05D004600 ORTHO05D005471 1.0e-31 140.2 77 92.2
Prupe.2G105900 Prunus persica HOM05D004600 ORTHO05D005471 1.0e-31 140.2 77 90.9
ClCG06G000640 Citrullus lanatus HOM05D004600 ORTHO05D005471 1.3e-31 139.8 77 89.6
MD02G1232800 Malus domestica HOM05D004600 ORTHO05D005471 1.3e-31 139.8 77 89.6
SalBow5G2739 Salvia bowleyana HOM05D004600 ORTHO05D005471 1.7e-31 139.4 115 66.1
SalBow5G4978 Salvia bowleyana HOM05D004600 ORTHO05D005471 1.7e-31 139.4 115 66.1
Cfa003694 Carpinus fangiana HOM05D004600 ORTHO05D005471 2.2e-31 139.0 77 88.3
HanXRQChr06g0175191 Helianthus annuus HOM05D004600 ORTHO05D005471 2.2e-31 139.0 77 90.9
Manes.09G132900 Manihot esculenta HOM05D004600 ORTHO05D005471 2.2e-31 139.0 78 88.5
Medtr5g094860 Medicago truncatula HOM05D004600 ORTHO05D005471 2.2e-31 139.0 77 90.9
Oeu011239.1 Olea europaea HOM05D004600 ORTHO05D005471 2.2e-31 139.0 78 91.0
Rhsim07G0038000 Rhododendron simsii HOM05D004600 ORTHO05D005471 2.2e-31 139.0 77 92.2
Ciclev10017245m.g Citrus clementina HOM05D004600 ORTHO05D005471 2.9e-31 138.7 115 65.2
Glyma.12G219600 Glycine max HOM05D004600 ORTHO05D005471 2.9e-31 138.7 75 93.3
Nitab4.5_0002801g0010 Nicotiana tabacum HOM05D004600 ORTHO05D005471 2.9e-31 138.7 77 89.6
CSS0047927 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 3.8e-31 138.3 115 66.1
Cc10_g08750 Coffea canephora HOM05D004600 ORTHO05D005471 3.8e-31 138.3 77 89.6
Migut.N01726 Erythranthe guttata HOM05D004600 ORTHO05D005471 3.8e-31 138.3 115 66.1
Gohir.A11G302200 Gossypium hirsutum HOM05D004600 ORTHO05D005471 3.8e-31 138.3 78 88.5
Actinidia05778 Actinidia chinensis HOM05D000441 ORTHO05D005471 4.9e-31 137.9 77 92.2
Glyma.13G281700 Glycine max HOM05D004600 ORTHO05D005471 4.9e-31 137.9 77 90.9
Nn6g33746 Nelumbo nucifera HOM05D004600 ORTHO05D005471 4.9e-31 137.9 77 89.6
Os02g0816500 Oryza sativa ssp. japonica HOM05D004600 ORTHO05D005471 4.9e-31 137.9 78 88.5
TAR374G1537 Trochodendron aralioides HOM05D004600 ORTHO05D005471 4.9e-31 137.9 78 88.5
vmacro13519 Vaccinium macrocarpon HOM05D004600 ORTHO05D005471 4.9e-31 137.9 77 90.9
DCAR_002257 Daucus carota HOM05D004600 ORTHO05D005471 6.5e-31 137.5 77 90.9
Sed0004677 Sechium edule HOM05D004600 ORTHO05D005471 6.5e-31 137.5 77 88.3
CDE02G3136 Ceratophyllum demersum HOM05D004600 ORTHO05D005471 8.4e-31 137.1 78 88.5
RcHm_v2.0_Chr1g0341631 Rosa chinensis HOM05D004600 ORTHO05D005471 8.4e-31 137.1 115 61.7
Sed0013640 Sechium edule HOM05D004600 ORTHO05D005471 8.4e-31 137.1 77 88.3
Aqoxy3G02625 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 1.4e-30 136.3 77 87.0
Aqoxy4G01604 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 1.4e-30 136.3 77 87.0
Haze_15791 Corylus avellana HOM05D004600 ORTHO05D005471 1.4e-30 136.3 77 88.3
Zm00001eb258870 Zea mays HOM05D004600 ORTHO05D005471 1.4e-30 136.3 78 87.2
MSTRG.28140 Avicennia marina HOM05D004600 ORTHO05D005471 1.9e-30 136.0 77 89.6
Phvul.008G274500 Phaseolus vulgaris HOM05D004600 ORTHO05D005471 1.9e-30 136.0 77 88.3
CAN.G179.37 Capsicum annuum HOM05D004600 ORTHO05D005471 2.5e-30 135.6 77 88.3
MBI04_g38566_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 3.2e-30 135.2 77 85.7
PGR042G2124 Punica granatum HOM05D004600 ORTHO05D005471 3.2e-30 135.2 78 84.6
CANSAT56G0524 Cannabis sativa HOM05D004600 ORTHO05D005471 4.2e-30 134.8 78 85.9
LjContig00272g0018481 Lotus japonicus HOM05D004600 ORTHO05D005471 4.2e-30 134.8 77 88.3
Peaxi162Scf00519g00014 Petunia axillaris HOM05D004600 ORTHO05D005471 4.2e-30 134.8 77 88.3
TWI34G1465 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 4.2e-30 134.8 77 87.0
VMungo0647G0484 Vigna mungo HOM05D004600 ORTHO05D005471 4.2e-30 134.8 78 84.6
CsaV3_6G006410 Cucumis sativus L. HOM05D004600 ORTHO05D005471 7.1e-30 134.0 77 87.0
DCAR_002240 Daucus carota HOM05D000064 ORTHO05D001307 7.1e-30 134.0 77 89.6
MELO3C022478.2 Cucumis melo HOM05D004600 ORTHO05D005471 9.3e-30 133.7 77 85.7
PSO063G0817 Papaver somniferum HOM05D004600 ORTHO05D005471 9.3e-30 133.7 77 84.4
PSO782G3599 Papaver somniferum HOM05D004600 ORTHO05D005471 9.3e-30 133.7 77 84.4
Peaxi162Scf00309g00111 Petunia axillaris HOM05D004600 ORTHO05D005471 9.3e-30 133.7 115 64.3
TWI32G0106 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 9.3e-30 133.7 77 85.7
CANSAT80G0198 Cannabis sativa HOM05D004600 ORTHO05D005471 1.2e-29 133.3 78 84.6
AUR62010214 Chenopodium quinoa HOM05D004600 ORTHO05D005471 1.2e-29 133.3 115 63.5
AUR62023888 Chenopodium quinoa HOM05D004600 ORTHO05D005471 1.2e-29 133.3 115 63.5
ATR0594G180 Amborella trichopoda HOM05D004600 ORTHO05D005471 1.6e-29 132.9 76 85.5
Aa31LG2G2070 Aethionema arabicum HOM05D004600 ORTHO05D005471 2.1e-29 132.5 115 63.5
Cpa.g.sc73.56 Carica papaya HOM05D004600 ORTHO05D005471 2.1e-29 132.5 77 87.0
HPP92_003331 Vanilla planifolia HOM05D004600 ORTHO05D005471 2.7e-29 132.1 77 84.4
SalBow2G1105 Salvia bowleyana HOM05D004600 ORTHO05D005471 7.9e-29 130.6 77 85.7
Potri.013G071100 Populus trichocarpa HOM05D004600 ORTHO05D005471 1.0e-28 130.2 77 83.1
Psat2g010800 Pisum sativum HOM05D004600 ORTHO05D005471 3.9e-28 128.3 77 84.4
Psat6g223560 Pisum sativum HOM05D004600 ORTHO05D005471 3.9e-28 128.3 77 84.4
Sabra13G0062000 Salix brachista HOM05D004600 ORTHO05D005471 6.7e-28 127.5 77 83.1
SEGI_02498 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 1.5e-27 126.3 77 79.2
FAN10G3323 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.9e-27 125.9 146 50.7
MBI14_g39049_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 3.3e-27 125.2 77 80.5
BcaNung06780 Brassica carinata HOM05D004600 ORTHO05D005471 9.6e-27 123.6 101 69.3
SEGI_10368 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 6.3e-26 120.9 77 75.3
unitig_22.g5795 Utricularia gibba HOM05D004600 ORTHO05D005471 8.2e-26 120.6 78 75.6
RcHm_v2.0_Chr1g0341741 Rosa chinensis HOM05D004600 ORTHO05D005471 1.4e-25 119.8 65 90.8
SMO140G0024 Selaginella moellendorffii HOM05D004600 ORTHO05D005471 2.9e-23 112.1 75 73.3
COL.COLO4_34174 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.2e-22 108.6 61 86.9
COL.COLO4_33093 Corchorus olitorius HOM05D004600 ORTHO05D005471 6.1e-21 104.4 59 86.4
Mapoly0038s0031 Marchantia polymorpha HOM05D004600 ORTHO05D005471 3.0e-20 102.1 75 64.0
arahy.Tifrunner.gnm1.ann1.TEM6YH Arachis hypogaea HOM05D004600 ORTHO05D005471 2.5e-19 99.0 57 87.7
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 5.7e-19 97.8 78 64.1
RhsimUnG0214300 Rhododendron simsii HOM05D004600 ORTHO05D005471 9.7e-19 97.1 75 64.0
CBR_g52286 Chara braunii HOM05D004600 ORTHO05D005471 3.7e-18 95.1 74 67.6
arahy.Tifrunner.gnm1.ann1.AN2C62 Arachis hypogaea HOM05D004600 ORTHO05D005471 6.3e-18 94.4 57 86.0
PSO017G3083 Papaver somniferum HOM05D004600 ORTHO05D005471 6.9e-17 90.9 51 86.3
BcaNung05668 Brassica carinata HOM05D004600 ORTHO05D005471 2.6e-16 89.0 78 64.1
Pp3c5_8620 Physcomitrium patens HOM05D004600 ORTHO05D005471 5.9e-16 87.8 76 55.3
Pp3c8_15900 Physcomitrium patens HOM05D004600 ORTHO05D005471 5.9e-16 87.8 78 53.8
BcaNung05666 Brassica carinata HOM05D004600 ORTHO05D005471 7.7e-16 87.4 78 62.8
COL.COLO4_33692 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.7e-15 86.3 48 87.5
RcHm_v2.0_Chr1g0341961 Rosa chinensis HOM05D004600 ORTHO05D005471 8.5e-15 84.0 51 84.3
RcHm_v2.0_Chr4g0446751 Rosa chinensis HOM05D004600 ORTHO05D005471 4.2e-14 81.6 50 84.0
MBI18_g40062_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 1.2e-13 80.1 45 86.7
RcHm_v2.0_Chr3g0457191 Rosa chinensis HOM05D004600 ORTHO05D005471 6.1e-13 77.8 51 78.4
SGA_v2.0_scaffold77G25264 Striga asiatica HOM05D000763 ORTHO05D000599 6.1e-13 77.8 42 92.9
MCO15G208 Micromonas commoda HOM05D004600 ORTHO05D005471 1.8e-12 76.3 73 54.8
HanXRQChr10g0286821 Helianthus annuus HOM05D004600 ORTHO05D005471 1.1e-11 73.6 40 87.5
Cre16.g670800 Chlamydomonas reinhardtii HOM05D004600 ORTHO05D005471 1.5e-11 73.2 75 54.7
RcHm_v2.0_Chr1g0342531 Rosa chinensis HOM05D004600 ORTHO05D005471 7.4e-11 70.9 40 87.5
HanXRQChr02g0044381 Helianthus annuus HOM05D004600 ORTHO05D005471 9.7e-11 70.5 40 82.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.8e-10 68.9 44 70.5
Pp3c15_6440 Physcomitrium patens HOM05D004600 ORTHO05D005471 6.3e-10 67.8 71 52.1
arahy.Tifrunner.gnm1.ann1.M3PSJH Arachis hypogaea HOM05D004254 ORTHO05D005184 1.4e-09 66.6 40 80.0
PRCOL_00002235 Prasinoderma coloniale HOM05D004600 ORTHO05D005471 3.1e-09 65.5 67 52.2
C03p20070 Brassica napus HOM05D004600 ORTHO05D005471 4.1e-09 65.1 100 44.0
COL.COLO4_33704 Corchorus olitorius HOM05D004600 ORTHO05D005471 5.3e-09 64.7 35 88.6
Pp3c12_22810 Physcomitrium patens HOM05D004600 ORTHO05D005471 5.9e-08 61.2 59 49.2
BcaC01g05996 Brassica carinata HOM05D004600 ORTHO05D005471 7.7e-08 60.8 98 42.9
AUR62013210 Chenopodium quinoa HOM05D004600 ORTHO05D005471 7.2e-06 54.3 64 50.0


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