Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G5530 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.4e-102 375.6 199 100.0
Aa31LG5G5540 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.4e-60 236.9 186 69.4
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.4e-38 161.0 182 50.0
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.3e-34 147.9 193 47.2
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.3e-34 147.9 193 47.2
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.2e-29 134.0 188 42.0
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.2e-28 128.6 182 40.7
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.2e-25 117.9 186 38.7
Aa31LG6G6270 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.4e-19 99.0 177 38.4
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 4.6e-16 89.0 174 33.9
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 1.0e-15 87.8 171 28.7
Aa31LG6G11940 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.9e-15 85.9 168 32.7
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 1.1e-14 84.3 174 31.6
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 1.5e-14 84.0 152 32.2
Aa31LG7G5280 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.3e-14 82.4 167 30.5
Aa31sc1921G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.3e-14 82.4 167 30.5
Aa31sc1930G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.3e-14 82.4 167 30.5
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 9.5e-14 81.3 160 30.6
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.8e-12 77.0 106 40.6
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 3.1e-12 76.3 171 31.0
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 4.0e-12 75.9 173 28.9
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 8.9e-12 74.7 168 28.0
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 1.2e-11 74.3 175 29.1
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 1.5e-11 73.9 171 26.9
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 2.6e-11 73.2 163 33.7
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 4.4e-11 72.4 171 32.2
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 2.2e-10 70.1 141 30.5
AT3G55680 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 2.9e-10 69.7 171 26.9
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 4.9e-10 68.9 184 29.3
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 6.4e-10 68.6 173 29.5
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 6.4e-10 68.6 173 29.5
Thecc.01G319900 Theobroma cacao HOM05D008191 ORTHO05D010044 2.0e-08 63.5 171 27.5
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 1.3e-07 60.8 152 27.6
Aa31LG6G11930 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.0e-07 59.7 135 29.6
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 9.5e-06 54.7 149 23.5


User provided reference genes

Program Settings