Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.4e-56 222.6 108 100.0
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.4e-27 125.6 104 57.7
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.3e-27 124.4 108 54.6
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.4e-21 104.8 108 51.9
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.4e-21 104.8 108 51.9
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.7e-21 103.6 106 48.1
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.6e-18 95.5 106 43.4
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 3.8e-17 91.7 105 41.0
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 5.0e-17 91.3 104 39.4
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 6.5e-17 90.9 105 40.0
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 4.7e-15 84.7 105 38.1
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 1.1e-13 80.1 100 37.0
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 1.1e-13 80.1 100 37.0
Aa31LG6G11930 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.4e-13 78.2 98 39.8
Aa31LG6G11940 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.4e-13 78.2 98 39.8
Aa31LG5G5530 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.7e-13 77.8 106 40.6
Aa31LG5G5540 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.7e-13 77.8 107 43.0
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 9.7e-13 77.0 109 38.5
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.2e-12 75.9 107 35.5
Aa31LG7G5280 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-12 75.5 98 38.8
Aa31sc1921G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-12 75.5 98 38.8
Aa31sc1930G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.8e-12 75.5 98 38.8
Aa31LG6G6270 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.4e-11 73.2 91 45.1
AT2G31425 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 4.1e-11 71.6 110 33.6
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 5.3e-11 71.2 107 34.6
AL4G26680 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 1.6e-10 69.7 113 31.9
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.6e-10 68.9 106 34.0
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 3.5e-10 68.6 108 34.3
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 3.5e-10 68.6 104 31.7
AT3G55680 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 4.5e-10 68.2 106 32.1
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 5.9e-10 67.8 104 32.7
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 1.0e-09 67.0 106 34.0
Carub.0007s2161 Capsella rubella HOM05D008191 ORTHO05D010044 1.3e-09 66.6 108 33.3
Thhalv10017377m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 3.8e-09 65.1 98 31.6
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.9e-08 62.8 107 32.7
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 3.2e-08 62.0 105 29.5
Thecc.01G319900 Theobroma cacao HOM05D008191 ORTHO05D010044 4.2e-08 61.6 104 28.8
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 3.6e-07 58.5 111 28.8
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 1.0e-06 57.0 104 28.8
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 3.0e-06 55.5 111 30.6
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 3.0e-06 55.5 71 36.6
Gorai.001G145900 Gossypium raimondii HOM05D008191 ORTHO05D010044 8.8e-06 53.9 99 26.3


User provided reference genes

Program Settings