Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 3.3e-98 361.7 181 100.0
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.8e-67 259.6 182 71.4
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.2e-51 204.9 183 60.1
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.2e-51 204.9 183 60.1
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.3e-41 171.0 179 50.8
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.5e-37 157.5 170 50.0
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 1.8e-35 153.3 171 43.9
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 4.0e-35 152.1 171 42.1
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 2.0e-34 149.8 172 40.7
Aa31LG5G5540 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.3e-33 147.1 180 43.3
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 3.7e-33 145.6 173 39.9
Aa31LG5G5530 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.3e-29 132.1 182 40.7
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 6.2e-28 128.3 140 44.3
Aa31LG6G11940 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.1e-27 127.5 168 44.0
AT2G31425 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 3.1e-27 125.9 175 37.1
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 5.2e-27 125.2 160 39.4
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 5.2e-27 125.2 160 39.4
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 8.9e-27 124.4 108 54.6
Aa31LG7G5280 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.3e-25 120.6 167 42.5
Aa31sc1921G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.3e-25 120.6 167 42.5
Aa31sc1930G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.3e-25 120.6 167 42.5
Aa31LG6G6270 Aethionema arabicum HOM05D008191 ORTHO05D010044 1.7e-25 120.2 183 42.6
AL4G26680 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 5.4e-24 115.2 160 35.6
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 2.1e-23 113.2 169 36.7
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.7e-23 112.8 170 37.6
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 4.6e-23 112.1 178 34.3
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 7.8e-23 111.3 167 35.3
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 1.0e-22 110.9 172 37.2
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 1.3e-22 110.5 172 32.6
Thhalv10017377m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.3e-22 110.5 134 38.8
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 2.3e-22 109.8 168 33.3
AT3G55680 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 6.6e-22 108.2 167 34.1
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 4.3e-21 105.5 167 37.1
Carub.0007s2161 Capsella rubella HOM05D008191 ORTHO05D010044 1.6e-20 103.6 170 34.1
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.8e-20 102.8 150 37.3
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 8.9e-19 97.8 176 33.0
Aa31LG6G11930 Aethionema arabicum HOM05D008191 ORTHO05D010044 7.1e-16 88.2 134 38.8
AT2G31432 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 9.2e-16 87.8 182 30.8
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 1.6e-15 87.0 176 30.1
Carub.0004s1275 Capsella rubella HOM05D008191 ORTHO05D010044 1.7e-14 83.6 179 30.2
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 3.3e-13 79.3 147 29.9
Thhalv10017899m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.6e-12 77.0 170 30.6
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 1.1e-11 74.3 147 28.6
AL1G25150 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 6.8e-11 71.6 163 28.2
Ciclev10024443m.g Citrus clementina HOM05D008191 ORTHO05D010044 8.9e-11 71.2 164 25.0
Gorai.001G145900 Gossypium raimondii HOM05D008191 ORTHO05D010044 1.2e-10 70.9 167 24.0
Gohir.D07G134300 Gossypium hirsutum HOM05D008191 ORTHO05D010044 2.6e-10 69.7 167 24.0
PSO724G1245 Papaver somniferum HOM05D008191 ORTHO05D010044 2.6e-10 69.7 171 29.2
PSO620G0001 Papaver somniferum HOM05D008191 ORTHO05D010044 4.4e-10 68.9 163 28.2
THA.LOC104801314 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 1.1e-08 64.3 166 28.9
Atru.chr5.927 Acer truncatum HOM05D008191 ORTHO05D010044 1.9e-08 63.5 143 28.7
RcHm_v2.0_Chr3g0486661 Rosa chinensis HOM05D008191 ORTHO05D010044 3.2e-08 62.8 160 28.1
CARHR125050 Cardamine hirsuta HOM05D008191 ORTHO05D010044 2.7e-07 59.7 56 50.0
Migut.O00479 Erythranthe guttata HOM05D022792 ORTHO05D001819 8.7e-06 54.7 171 25.1
Sabra13G0004900 Salix brachista HOM05D011459 ORTHO05D013640 8.7e-06 54.7 166 24.1


User provided reference genes

Program Settings