Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 7.2e-215 750.4 392 100.0
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 3.7e-163 578.6 390 79.0
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 5.4e-162 574.7 390 78.7
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 1.2e-161 573.5 392 78.3
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 3.5e-161 572.0 391 78.3
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 2.8e-158 562.4 394 76.9
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 1.8e-157 559.7 393 77.6
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 3.1e-157 558.9 393 77.1
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 4.0e-157 558.5 393 77.6
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 5.8e-156 554.7 393 76.8
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 7.5e-156 554.3 394 76.4
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 1.9e-154 549.7 394 76.1
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 2.1e-153 546.2 394 75.9
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 9.5e-151 537.3 416 71.9
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 2.5e-143 512.7 393 70.5
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 3.3e-143 512.3 393 73.0
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 1.3e-134 483.8 349 75.1
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 1.8e-133 479.9 354 74.3
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 3.0e-120 436.0 391 62.1
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 4.8e-118 428.7 373 62.7
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.9e-117 424.9 374 62.0
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 3.4e-116 422.5 376 61.2
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 1.1e-114 417.5 371 62.0
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 5.5e-114 415.2 374 61.0
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 7.1e-114 414.8 393 59.0
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 1.8e-112 410.2 388 57.7
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 3.9e-112 409.1 374 61.0
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 1.9e-111 406.8 385 57.9
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 2.5e-111 406.4 375 58.9
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 2.5e-111 406.4 392 57.9
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 4.3e-111 405.6 382 57.9
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 2.1e-110 403.3 374 59.6
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 8.2e-110 401.4 374 59.9
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 1.8e-109 400.2 392 56.6
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 3.1e-109 399.4 302 73.8
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 3.1e-109 399.4 389 56.8
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 4.1e-109 399.1 392 56.6
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 4.1e-109 399.1 388 57.5
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 7.6e-108 394.8 393 56.7
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 1.0e-107 394.4 393 56.7
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 6.5e-107 391.7 394 56.9
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 3.2e-106 389.4 402 55.0
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 4.2e-106 389.0 393 56.7
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 7.2e-106 388.3 387 55.3
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 1.2e-105 387.5 401 54.6
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 1.6e-105 387.1 399 54.1
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 2.7e-105 386.3 397 54.4
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 3.6e-105 386.0 376 56.6
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 7.9e-105 384.8 385 56.1
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 1.8e-104 383.6 397 53.7
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 1.8e-104 383.6 385 55.3
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.3e-104 383.3 416 54.1
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 1.9e-103 380.2 392 55.1
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.3e-103 379.0 374 57.2
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 7.4e-103 378.3 415 51.1
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 7.4e-103 378.3 375 53.9
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 6.3e-102 375.2 383 55.1
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 2.4e-101 373.2 374 54.8
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 5.3e-101 372.1 389 54.2
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 5.3e-101 372.1 385 55.6
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 3.4e-100 369.4 377 56.5
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 7.7e-100 368.2 396 53.5
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 1.3e-99 367.5 384 54.2
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 2.2e-99 366.7 391 51.9
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 2.5e-98 363.2 374 53.2
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 2.5e-98 363.2 391 51.9
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 4.2e-98 362.5 375 54.7
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 7.2e-98 361.7 372 52.4
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 1.2e-97 360.9 389 53.5
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 6.1e-97 358.6 371 52.8
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 1.0e-96 357.8 375 54.1
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 1.4e-96 357.5 390 50.5
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 3.0e-96 356.3 331 58.6
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 5.1e-96 355.5 375 54.1
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 8.8e-96 354.8 375 53.1
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 2.0e-95 353.6 369 52.0
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 2.6e-95 353.2 375 53.1
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 9.7e-95 351.3 370 51.1
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 2.8e-94 349.7 375 53.6
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 2.8e-94 349.7 390 50.8
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 8.2e-94 348.2 372 51.3
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 6.9e-93 345.1 496 44.2
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 1.2e-92 344.4 371 50.4
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 7.7e-92 341.7 372 51.9
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 1.3e-91 340.9 374 50.8
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 3.8e-91 339.3 390 50.5
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 6.5e-91 338.6 347 54.5
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.3e-88 330.1 336 55.4
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 3.0e-88 329.7 348 54.0
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.6e-87 326.6 338 55.0
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 3.7e-86 322.8 377 51.5
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 3.7e-86 322.8 387 49.4
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 1.1e-85 321.2 378 49.2
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 2.4e-85 320.1 316 55.1
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 3.1e-85 319.7 349 52.7
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 1.0e-83 314.7 492 41.9
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 3.8e-83 312.8 372 47.0
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 3.8e-83 312.8 332 55.4
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 3.8e-83 312.8 338 51.8
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 6.5e-83 312.0 330 53.6
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 6.5e-83 312.0 366 48.6
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 2.5e-82 310.1 297 57.2
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 5.5e-82 308.9 353 50.1
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 1.2e-81 307.8 338 51.8
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 3.6e-81 306.2 388 47.2
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 2.3e-80 303.5 371 48.8
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 3.0e-80 303.1 605 36.4
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 1.5e-79 300.8 338 52.4
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 2.2e-78 297.0 437 43.0
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 5.3e-77 292.4 366 46.7
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 7.7e-76 288.5 262 59.9
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 1.9e-74 283.9 339 49.6
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 2.5e-74 283.5 374 44.9
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 3.4e-71 273.1 299 51.5
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 1.7e-67 260.8 336 45.8
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 2.3e-67 260.4 376 43.9
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 2.3e-64 250.4 383 41.3
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 1.5e-63 247.7 337 43.6
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 2.0e-63 247.3 332 44.0
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 2.8e-62 243.4 383 41.8
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 1.2e-60 238.0 335 43.9
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 2.8e-57 226.9 160 71.9
BcaB01g01629 Brassica carinata HOM05D004482 ORTHO05D005212 2.9e-54 216.9 198 66.2
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 4.1e-53 213.0 155 69.7
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 1.5e-50 204.5 370 36.2
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 3.6e-49 199.9 128 75.8
SalBow3G0632 Salvia bowleyana HOM05D004482 ORTHO05D005212 4.7e-49 199.5 261 45.6
Gohir.D02G026860 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.0e-48 196.4 177 62.1
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 3.4e-47 193.4 382 34.6
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 4.6e-44 183.0 160 62.5
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 7.8e-44 182.2 235 46.8
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 1.9e-42 177.6 377 31.6
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 1.6e-41 174.5 389 32.6
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 9.9e-39 165.2 356 32.6
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.9e-38 162.9 138 62.3
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.1e-37 159.1 208 44.2
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 2.1e-36 157.5 115 67.8
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 2.1e-36 157.5 115 67.8
Oeu006194.1 Olea europaea HOM05D004482 ORTHO05D005212 7.8e-36 155.6 171 49.1
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 8.1e-33 145.6 332 31.9
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 1.5e-31 141.4 104 67.3
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 3.8e-30 136.7 259 39.4
FAN16G2719 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.1e-28 131.0 133 60.2
TWI09G0568 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 1.1e-24 118.6 126 55.6
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-21 106.7 162 38.3
VMungo0251G0179 Vigna mungo HOM05D004482 ORTHO05D005212 2.7e-20 104.0 123 50.4
C07p07110 Brassica napus HOM05D000057 ORTHO05D005212 5.6e-18 96.3 133 47.4
BolC7t41130H Brassica oleracea HOM05D000057 ORTHO05D005212 5.6e-18 96.3 133 47.4
BcaC08g43547 Brassica carinata HOM05D004482 ORTHO05D005212 2.1e-17 94.4 84 65.5
BolC4t26969H Brassica oleracea HOM05D004482 ORTHO05D005212 2.8e-17 94.0 72 70.8
BcaC02g08439 Brassica carinata HOM05D004482 ORTHO05D005212 8.1e-17 92.4 84 65.5
C04p54180 Brassica napus HOM05D004482 ORTHO05D005212 8.1e-17 92.4 72 69.4
C08p00860 Brassica napus HOM05D004482 ORTHO05D005212 2.4e-16 90.9 73 71.2
DCAR_012442 Daucus carota HOM05D004482 ORTHO05D005212 3.1e-16 90.5 105 47.6
CDE09G0489 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.2e-15 88.6 118 43.2
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 9.9e-15 85.5 340 27.4
A10p31820 Brassica napus HOM05D004482 ORTHO05D005212 1.4e-13 81.6 55 78.2
BraA10t45227Z Brassica rapa HOM05D004482 ORTHO05D005212 1.4e-13 81.6 55 78.2
EL10Ac4g09026 Beta vulgaris HOM05D004482 ORTHO05D005212 1.0e-11 75.5 118 39.0
Cpa.g.sc173.8 Carica papaya HOM05D004482 ORTHO05D005212 4.8e-09 66.6 71 56.3


User provided reference genes

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