Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 7.9e-146 520.4 258 100.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 7.7e-125 450.7 247 90.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-123 446.8 253 87.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.2e-123 444.9 253 87.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 2.1e-122 442.6 255 85.1
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 8.0e-122 440.7 248 87.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.0e-121 440.3 253 87.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.0e-121 440.3 247 87.0
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.0e-121 438.7 249 87.1
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 3.0e-121 438.7 247 87.4
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 4.0e-121 438.3 249 87.1
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 3.4e-120 435.3 248 86.3
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 7.5e-120 434.1 247 86.6
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 9.8e-120 433.7 246 85.8
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.7e-117 425.6 226 91.2
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 2.9e-116 422.2 226 90.3
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 5.0e-116 421.4 226 89.4
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 4.2e-115 418.3 226 89.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.1e-114 416.0 246 81.7
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.7e-103 379.8 252 72.2
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 2.2e-103 379.4 245 72.2
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.7e-103 378.6 252 71.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 4.9e-103 378.3 253 70.8
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 8.3e-103 377.5 246 72.8
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 3.5e-101 372.1 250 72.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 3.5e-101 372.1 247 72.9
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.0e-100 370.5 242 73.1
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.3e-100 369.4 247 70.9
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 6.6e-100 367.9 223 74.4
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 9.5e-99 364.0 217 75.6
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.6e-98 363.2 245 71.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.1e-98 362.8 246 69.9
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.8e-98 362.5 253 71.1
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 6.2e-98 361.3 242 71.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 8.1e-98 360.9 247 69.2
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.1e-97 359.0 219 73.5
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 3.1e-97 359.0 234 71.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 8.9e-97 357.5 247 68.8
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.2e-96 357.1 255 65.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.6e-96 355.9 219 73.1
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 3.4e-96 355.5 240 68.3
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 4.4e-96 355.1 251 68.5
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.9e-95 352.4 235 71.1
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.9e-95 352.4 222 73.4
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.9e-95 352.4 245 66.9
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.7e-95 352.1 217 74.2
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 3.7e-95 352.1 217 73.7
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 3.7e-95 352.1 237 69.6
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 3.7e-95 352.1 226 70.4
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 4.9e-95 351.7 219 72.1
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 6.4e-95 351.3 249 67.9
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 8.3e-95 350.9 252 67.9
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 8.3e-95 350.9 251 66.9
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.9e-94 349.7 248 67.3
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 3.2e-94 349.0 220 72.3
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 4.1e-94 348.6 222 70.7
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 5.4e-94 348.2 247 67.6
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 9.2e-94 347.4 247 67.2
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 9.2e-94 347.4 254 66.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 9.2e-94 347.4 241 67.6
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.2e-93 347.1 251 66.1
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.6e-93 346.7 244 67.2
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.1e-93 346.3 247 67.2
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 2.1e-93 346.3 246 66.7
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.1e-93 346.3 246 68.3
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 6.0e-93 344.7 244 66.8
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 6.0e-93 344.7 242 68.6
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 7.8e-93 344.4 230 68.3
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-92 343.6 251 65.7
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.7e-92 343.2 244 67.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 2.3e-92 342.8 242 67.4
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.3e-92 342.8 244 67.6
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.1e-91 340.5 245 67.3
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.5e-91 340.1 257 64.2
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 5.6e-91 338.2 247 65.6
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 5.6e-91 338.2 228 70.2
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 7.3e-91 337.8 235 66.8
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 7.3e-91 337.8 235 67.7
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.1e-90 336.3 237 67.1
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.6e-90 335.5 267 63.3
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 3.6e-90 335.5 239 66.5
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.6e-90 335.5 219 70.3
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 8.1e-90 334.3 251 64.9
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.1e-89 334.0 241 64.7
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.4e-89 333.6 215 69.8
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.3e-89 332.8 217 70.0
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 5.2e-89 331.6 258 64.0
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 5.2e-89 331.6 222 69.8
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.7e-87 326.6 251 64.9
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.7e-87 325.5 236 64.0
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 4.9e-87 325.1 223 68.2
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.4e-86 323.6 217 68.2
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 4.1e-86 322.0 243 63.8
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.6e-85 320.1 290 57.2
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.6e-85 320.1 343 50.4
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 6.0e-85 318.2 228 66.2
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 7.8e-85 317.8 206 70.9
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 4.4e-80 302.0 194 73.7
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.9e-79 299.3 220 65.0
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 4.6e-77 292.0 165 79.4
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.4e-73 280.4 206 63.1
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 9.0e-73 277.7 199 66.8
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 7.1e-70 268.1 215 60.9
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 8.7e-68 261.2 235 55.7
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.2e-62 242.3 237 53.2
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 5.1e-60 235.3 217 52.1
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.6e-56 223.0 239 50.6
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.2e-55 219.9 141 70.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.9e-47 193.0 215 47.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.9e-43 180.3 101 75.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.9e-43 180.3 127 65.4
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 4.1e-41 172.6 108 77.8
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 7.7e-40 168.3 211 44.5
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.0e-36 156.4 212 40.1
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 4.8e-34 149.1 210 41.4
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.2e-34 148.3 95 77.9
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.2e-34 148.3 95 77.9
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.7e-32 141.7 113 67.3
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.0e-31 141.4 109 62.4
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.8e-31 139.4 156 51.3
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.8e-31 139.4 156 51.3
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.4e-28 131.0 110 58.2
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.2e-26 123.6 121 55.4
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.1e-25 118.2 79 72.2
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 4.2e-22 109.4 82 67.1
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.4e-20 104.4 58 77.6
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.4e-20 104.4 100 59.0
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 5.2e-20 102.4 73 80.8
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.7e-18 97.4 213 30.5
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 3.5e-16 89.7 196 32.7
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.5e-14 84.3 48 81.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 4.2e-14 82.8 185 33.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.6e-13 79.7 55 65.5


User provided reference genes

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