Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.0e-49 198.7 99 100.0
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 1.8e-37 159.1 99 79.8
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 8.8e-37 156.8 100 80.0
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 1.2e-36 156.4 99 79.8
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 4.4e-36 154.5 99 76.8
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 7.5e-36 153.7 99 78.8
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.8e-34 149.1 102 75.5
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 3.8e-32 141.4 91 76.9
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 2.5e-31 138.7 105 70.5
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 3.3e-31 138.3 106 69.8
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 5.6e-31 137.5 99 66.7
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.6e-30 136.0 105 70.5
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.6e-30 136.0 105 70.5
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 6.1e-30 134.0 104 69.2
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 1.6e-25 119.4 100 58.0
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 7.8e-25 117.1 99 57.6
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.1e-23 113.2 100 59.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.5e-23 112.8 100 58.0
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 5.6e-23 110.9 100 57.0
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 9.5e-23 110.2 103 58.3
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 9.5e-23 110.2 103 58.3
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 9.5e-23 110.2 103 58.3
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 1.2e-22 109.8 99 60.6
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 2.1e-22 109.0 104 60.6
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 2.8e-22 108.6 100 54.0
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 6.2e-22 107.5 99 59.6
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 6.2e-22 107.5 99 50.5
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.1e-21 106.7 100 55.0
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.4e-21 106.3 100 53.0
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 1.8e-21 105.9 100 52.0
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.3e-21 105.5 99 59.6
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-21 105.1 100 62.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 3.1e-21 105.1 100 62.0
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 4.0e-21 104.8 100 51.0
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-20 103.2 99 60.6
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.5e-20 102.8 105 51.4
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 2.6e-20 102.1 94 54.3
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 2.6e-20 102.1 94 56.4
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.4e-20 101.3 100 54.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 4.4e-20 101.3 94 50.0
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 7.5e-20 100.5 101 52.5
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 7.5e-20 100.5 95 53.7
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 1.3e-19 99.8 99 49.5
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.3e-19 99.8 99 51.5
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.3e-19 99.8 99 51.5
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 1.7e-19 99.4 99 52.5
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 2.2e-19 99.0 93 49.5
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 2.9e-19 98.6 99 54.5
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 2.9e-19 98.6 78 60.3
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 8.3e-19 97.1 93 49.5
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.1e-18 96.7 92 56.5
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.4e-18 96.3 99 51.5
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 1.9e-18 95.9 75 64.0
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 2.4e-18 95.5 78 69.2
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 2.4e-18 95.5 78 69.2
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 2.4e-18 95.5 78 69.2
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 3.2e-18 95.1 88 54.5
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 4.1e-18 94.7 61 72.1
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 5.4e-18 94.4 95 50.5
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 5.4e-18 94.4 98 50.0
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.6e-17 92.8 93 49.5
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 1.6e-17 92.8 91 51.6
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 3.5e-17 91.7 98 48.0
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 4.6e-17 91.3 93 52.7
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 3.0e-16 88.6 111 46.8
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 3.0e-16 88.6 111 46.8
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 3.0e-16 88.6 67 64.2
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 6.6e-16 87.4 111 48.6
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 1.1e-15 86.7 111 46.8
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.5e-15 86.3 93 46.2
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 2.5e-15 85.5 92 51.1
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.5e-15 85.5 69 58.0
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 3.3e-15 85.1 67 61.2
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 4.3e-15 84.7 99 49.5
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 4.3e-15 84.7 99 49.5
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 7.3e-15 84.0 93 45.2
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 7.3e-15 84.0 68 58.8
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 7.3e-15 84.0 90 52.2
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 9.5e-15 83.6 69 53.6
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.2e-14 83.2 92 47.8
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.2e-14 83.2 92 47.8
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 2.1e-14 82.4 80 53.8
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 2.1e-14 82.4 65 55.4
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 3.6e-14 81.6 92 46.7
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 6.2e-14 80.9 71 53.5
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 6.2e-14 80.9 95 46.3
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.4e-13 79.7 88 44.3
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 1.4e-13 79.7 74 50.0
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 1.8e-13 79.3 80 51.2
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 3.1e-13 78.6 84 47.6
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 3.1e-13 78.6 62 59.7
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 3.1e-13 78.6 62 59.7
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 5.2e-13 77.8 84 51.2
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 8.9e-13 77.0 91 40.7
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 1.2e-12 76.6 100 47.0
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 1.2e-12 76.6 107 47.7
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 2.0e-12 75.9 94 43.6
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 2.0e-12 75.9 105 46.7
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 2.6e-12 75.5 106 46.2
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 2.6e-12 75.5 104 46.2
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 3.4e-12 75.1 78 47.4
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 4.4e-12 74.7 118 36.4
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 4.4e-12 74.7 133 39.1
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 4.4e-12 74.7 80 51.2
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 5.8e-12 74.3 67 56.7
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 5.8e-12 74.3 67 56.7
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 2.2e-11 72.4 88 47.7
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 3.7e-11 71.6 92 46.7
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 8.3e-11 70.5 79 45.6
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.4e-10 69.7 88 42.0
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 1.4e-10 69.7 79 44.3
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 2.4e-10 68.9 106 44.3
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 4.1e-10 68.2 79 44.3
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 1.2e-09 66.6 73 43.8
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 2.1e-09 65.9 86 43.0
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 2.1e-09 65.9 58 53.4
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 2.7e-09 65.5 41 73.2
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 1.3e-08 63.2 85 44.7
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.3e-08 63.2 131 35.9
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.3e-08 63.2 41 68.3
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 1.7e-08 62.8 54 59.3
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 2.3e-08 62.4 74 45.9
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 5.1e-08 61.2 70 47.1
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 8.6e-08 60.5 72 41.7
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 8.6e-08 60.5 73 45.2
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.9e-07 59.3 73 45.2
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 1.9e-07 59.3 60 48.3
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.5e-07 58.9 95 43.2
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.5e-07 58.9 95 44.2
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 7.3e-07 57.4 79 44.3
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 9.5e-07 57.0 83 41.0


User provided reference genes

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