Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.8e-232 808.9 427 100.0
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 2.7e-122 443.0 436 62.4
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 6.4e-116 421.8 438 60.7
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 3.6e-111 406.0 437 59.7
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 6.4e-108 395.2 434 58.8
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.1e-107 394.4 434 58.5
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 4.1e-107 392.5 434 58.3
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 4.7e-103 379.0 430 56.7
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.6e-98 364.0 433 55.2
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.6e-98 364.0 433 55.2
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 7.8e-98 361.7 455 53.4
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 5.2e-94 349.0 429 55.0
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 6.8e-94 348.6 430 53.3
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 4.5e-77 292.7 431 49.9
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.5e-56 223.8 458 41.5
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 3.3e-56 223.4 475 39.8
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.2e-55 220.7 495 38.0
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 9.0e-54 215.3 456 40.8
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.9e-52 210.3 456 39.0
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.1e-51 208.4 445 40.2
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.9e-51 207.6 494 37.9
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.2e-51 206.8 471 38.4
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 5.5e-51 206.1 454 39.2
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.2e-50 204.9 202 63.4
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 1.2e-50 204.9 455 38.5
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 6.1e-50 202.6 445 38.9
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 5.7e-48 196.1 449 38.5
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 9.7e-48 195.3 445 38.7
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 8.2e-47 192.2 459 35.9
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.8e-46 191.0 450 36.4
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 2.4e-46 190.7 449 37.6
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 4.1e-46 189.9 453 36.6
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 9.1e-46 188.7 482 38.4
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 9.1e-46 188.7 510 35.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.2e-45 188.3 470 37.2
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.5e-45 188.0 453 36.6
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 2.0e-45 187.6 485 35.9
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.6e-45 187.2 456 35.3
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 3.4e-45 186.8 464 36.4
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 4.5e-45 186.4 444 36.5
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 5.9e-45 186.0 461 36.9
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.7e-44 184.5 473 36.2
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.2e-44 184.1 449 36.3
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 3.8e-44 183.3 495 35.2
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 6.5e-44 182.6 455 35.4
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.4e-43 181.4 457 37.4
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 2.5e-43 180.6 460 38.3
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 4.2e-43 179.9 467 37.3
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.1e-42 177.6 216 52.3
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.7e-42 177.2 500 37.2
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.3e-41 174.1 446 34.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 3.9e-41 173.3 449 37.2
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.9e-41 173.3 447 36.0
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 6.7e-41 172.6 453 34.4
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 2.0e-40 171.0 445 35.7
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 3.3e-40 170.2 444 34.7
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.3e-39 168.3 478 34.9
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.7e-39 166.8 455 35.8
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.7e-39 166.8 455 35.8
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 4.1e-38 163.3 460 33.0
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 5.3e-38 162.9 478 34.1
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.2e-37 161.8 460 33.5
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.2e-37 161.8 519 34.1
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 1.5e-37 161.4 493 33.5
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.5e-37 161.4 453 35.1
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 3.5e-37 160.2 452 33.2
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 4.5e-37 159.8 466 34.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 7.7e-37 159.1 445 35.1
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 7.7e-37 159.1 461 33.2
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.0e-36 158.7 448 35.5
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 1.0e-36 158.7 354 38.1
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 1.6e-34 151.4 454 33.0
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.6e-34 150.2 443 33.6
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 6.1e-34 149.4 453 34.9
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 4.4e-32 143.3 437 33.9
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.8e-31 140.6 471 32.3
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 3.1e-30 137.1 459 31.8
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 4.1e-30 136.7 314 33.4
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 7.0e-30 136.0 453 31.8
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 1.6e-29 134.8 436 32.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 4.5e-29 133.3 180 48.3
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 7.7e-29 132.5 436 32.1
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.3e-28 131.7 473 30.4
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.7e-28 131.3 407 31.4
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 2.9e-28 130.6 466 32.6
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 3.8e-28 130.2 448 33.5
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 5.0e-28 129.8 490 32.4
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.5e-27 128.3 429 33.6
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 9.4e-27 125.6 449 31.2
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 6.1e-26 122.9 447 32.0
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.8e-25 121.3 454 30.6
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 6.8e-25 119.4 487 30.4
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.5e-24 118.2 470 29.6
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 8.3e-23 112.5 339 33.6
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 5.4e-22 109.8 128 50.8
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 5.9e-21 106.3 497 29.6
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 5.0e-20 103.2 445 27.6
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 9.4e-19 99.0 493 27.8
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 1.4e-17 95.1 236 31.4
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 4.0e-17 93.6 407 29.7
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 8.8e-17 92.4 212 34.9
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 3.7e-15 87.0 285 31.9
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.4e-14 85.1 144 44.4
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 7.0e-14 82.8 296 31.4
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.5e-13 80.1 141 43.3
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 3.6e-10 70.5 297 28.6
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 8.3e-07 59.3 138 35.5


User provided reference genes

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