Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 3.4e-264 914.4 471 100.0
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 4.2e-145 518.8 473 65.1
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.6e-136 489.2 473 61.3
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 6.1e-136 488.4 473 62.6
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 5.2e-135 485.3 477 62.3
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 4.7e-128 462.2 475 60.0
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 3.4e-126 456.1 473 59.4
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 6.6e-122 441.8 475 60.4
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 2.3e-119 433.3 474 59.1
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 2.3e-119 433.3 475 59.8
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 2.3e-119 433.3 475 59.8
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 6.8e-119 431.8 473 58.6
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 5.7e-118 428.7 479 58.0
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 2.9e-114 416.4 491 54.8
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 1.6e-48 198.0 495 36.6
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 6.3e-48 196.1 506 33.8
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 1.7e-45 188.0 513 34.5
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 1.1e-41 175.3 482 34.6
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 2.5e-41 174.1 497 32.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 5.7e-41 172.9 512 34.2
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 3.7e-40 170.2 475 33.5
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 9.1e-39 165.6 517 32.7
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.0e-37 159.8 489 33.9
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 8.5e-37 159.1 507 32.7
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.4e-36 158.3 543 33.0
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 9.4e-36 155.6 518 33.6
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 3.9e-34 150.2 496 32.7
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.5e-33 148.3 473 34.5
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 2.0e-33 147.9 482 33.2
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 3.7e-32 143.7 514 32.7
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 4.1e-31 140.2 493 31.8
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.9e-30 136.3 494 31.0
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 7.7e-30 136.0 493 30.8
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.9e-29 134.0 492 31.1
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 1.5e-28 131.7 496 30.8
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-28 131.3 494 30.0
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.2e-27 128.6 529 29.5
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 5.2e-26 123.2 501 27.9
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 7.4e-25 119.4 525 30.7
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.7e-24 118.2 511 28.4
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 1.1e-23 115.5 493 29.2
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.4e-23 115.2 518 28.2
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 1.4e-23 115.2 482 27.8
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 7.0e-23 112.8 484 27.5
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 9.1e-23 112.5 492 28.9
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.2e-22 112.1 502 29.5
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 5.9e-22 109.8 259 37.1
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.0e-21 109.0 257 37.7
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 1.0e-21 109.0 494 27.5
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.3e-21 108.6 486 28.6
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 3.8e-21 107.1 252 36.9
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 3.8e-21 107.1 497 28.8
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 5.0e-21 106.7 486 28.4
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 1.9e-20 104.8 492 27.4
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.2e-19 102.1 493 28.4
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 3.6e-19 100.5 463 25.9
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 3.6e-19 100.5 523 29.1
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.6e-19 100.5 258 39.1
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 4.7e-19 100.1 487 28.5
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 8.0e-19 99.4 477 29.8
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 1.0e-18 99.0 464 26.1
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 1.0e-18 99.0 445 28.3
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 1.8e-18 98.2 516 27.3
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 5.2e-18 96.7 520 27.3
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 1.5e-17 95.1 494 26.9
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 1.5e-17 95.1 484 27.3
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 2.0e-17 94.7 271 36.5
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.6e-17 94.4 415 28.0
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 2.6e-17 94.4 521 26.1
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 1.7e-16 91.7 493 27.4
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 2.2e-16 91.3 485 26.4
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 2.2e-16 91.3 508 26.8
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 1.8e-15 88.2 224 35.3
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.4e-15 87.8 271 33.9
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 9.1e-15 85.9 366 30.1
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 3.5e-14 84.0 498 25.5
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 4.5e-14 83.6 515 28.2
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 4.5e-14 83.6 482 26.3
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 1.0e-13 82.4 521 25.9
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.3e-13 82.0 522 27.4
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 1.3e-13 82.0 508 26.0
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 6.5e-13 79.7 513 25.5
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 6.5e-13 79.7 271 32.5
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 8.5e-13 79.3 525 26.7
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 1.1e-12 79.0 502 26.5
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 2.5e-12 77.8 507 27.2
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 2.5e-12 77.8 515 24.1
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 9.4e-12 75.9 503 25.6
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 1.2e-11 75.5 183 42.1
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 1.6e-11 75.1 331 28.4
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.6e-11 75.1 514 25.5
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 2.1e-11 74.7 501 26.5
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.7e-11 74.3 504 26.6
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 2.7e-11 74.3 183 41.5
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 4.7e-11 73.6 521 24.8
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 6.1e-11 73.2 514 25.1
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 6.1e-11 73.2 552 24.3
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 6.1e-11 73.2 518 26.1
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 8.0e-11 72.8 267 28.5
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 8.0e-11 72.8 521 25.3
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 8.0e-11 72.8 515 25.6
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 1.0e-10 72.4 544 25.9
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 1.0e-10 72.4 521 24.0
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 1.8e-10 71.6 276 29.3
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.3e-10 71.2 525 25.5
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.0e-10 70.5 514 24.7
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 5.2e-10 70.1 512 24.8
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 5.2e-10 70.1 514 25.7
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 8.8e-10 69.3 521 26.3
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 8.8e-10 69.3 513 26.3
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-09 68.6 504 26.4
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 2.0e-09 68.2 516 24.8
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 2.0e-09 68.2 510 23.5
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 3.4e-09 67.4 520 25.2
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 4.4e-09 67.0 541 25.1
A02p24230 Brassica napus HOM05D002977 ORTHO05D040183 5.7e-09 66.6 131 48.1
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 5.7e-09 66.6 270 30.4
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 5.7e-09 66.6 271 30.3
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 7.5e-09 66.2 269 31.2
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 9.8e-09 65.9 539 25.4
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.3e-08 65.5 193 33.2
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.7e-08 65.1 503 24.5
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.8e-08 64.3 522 24.9
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 6.3e-08 63.2 170 35.9
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 1.1e-07 62.4 382 26.7
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.4e-07 62.0 528 25.0
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 1.4e-07 62.0 254 32.3
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.4e-07 62.0 340 25.3
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.8e-07 61.6 340 25.6
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.4e-07 61.2 339 25.4
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 2.4e-07 61.2 523 25.0
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 4.1e-07 60.5 512 23.8
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 4.1e-07 60.5 238 29.0
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 5.4e-07 60.1 397 26.4
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 5.4e-07 60.1 487 24.8
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 7.0e-07 59.7 409 27.6
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 7.0e-07 59.7 409 27.6
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.1e-07 59.3 226 32.7
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.2e-06 58.9 518 23.9
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.6e-06 58.5 505 24.2
MD04G1068300 Malus domestica HOM05D002977 ORTHO05D003225 2.0e-06 58.2 209 33.5
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 2.7e-06 57.8 490 24.5
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.7e-06 57.8 381 28.1
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 2.7e-06 57.8 488 24.4
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 4.5e-06 57.0 504 23.2
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 5.9e-06 56.6 267 30.3
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 5.9e-06 56.6 531 21.8
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 7.7e-06 56.2 511 23.3


User provided reference genes

Program Settings