Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 4.7e-241 837.4 416 100.0
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.1e-216 755.0 416 87.5
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 2.0e-215 752.3 416 87.0
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.3e-211 739.6 417 87.1
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 1.6e-209 732.6 410 86.6
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.1e-209 732.3 416 85.8
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 5.3e-208 727.6 417 85.1
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 9.0e-208 726.9 416 86.1
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.7e-206 722.6 419 85.2
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.7e-206 722.6 416 84.6
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 2.9e-206 721.8 418 85.2
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 4.9e-206 721.1 420 85.0
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.6e-204 716.1 416 84.1
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.3e-195 686.4 394 85.5
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 2.5e-194 682.2 417 79.9
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.2e-165 584.3 426 67.6
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 7.2e-165 584.3 427 67.2
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.6e-164 582.0 427 66.7
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 5.2e-163 578.2 428 65.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.8e-160 569.7 430 66.5
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 7.0e-160 567.8 428 65.7
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 7.0e-160 567.8 424 65.1
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.6e-159 566.6 427 65.8
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.5e-159 565.5 426 66.2
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 5.9e-159 564.7 426 65.7
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.7e-158 563.1 428 67.1
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.7e-158 563.1 428 66.1
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 2.2e-158 562.8 432 63.7
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 2.9e-158 562.4 420 64.3
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 8.5e-158 560.8 426 65.7
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.9e-157 559.7 413 67.1
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 1.9e-157 559.7 430 64.9
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 5.5e-157 558.1 430 65.1
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.6e-156 556.6 434 63.8
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 2.7e-156 555.8 423 64.8
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.7e-156 555.8 428 64.3
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 8.0e-156 554.3 426 64.1
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 3.0e-155 552.4 429 64.8
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 3.0e-155 552.4 424 64.9
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 5.2e-155 551.6 433 64.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 6.8e-155 551.2 431 63.3
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 8.8e-155 550.8 431 64.7
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 8.8e-155 550.8 436 65.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.5e-154 550.1 429 65.0
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.4e-154 548.5 434 63.1
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 7.5e-154 547.7 431 62.4
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.3e-153 547.0 429 65.3
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.7e-153 546.6 428 64.3
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.7e-153 546.6 428 64.3
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.2e-153 546.2 428 64.0
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 2.8e-153 545.8 432 63.2
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.9e-153 545.0 428 64.0
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 1.1e-152 543.9 426 63.6
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.4e-152 543.5 443 60.9
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.4e-152 542.7 433 62.4
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 3.1e-152 542.3 423 64.1
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 5.4e-152 541.6 423 65.0
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 7.0e-152 541.2 429 63.2
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.2e-151 540.4 433 61.9
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.0e-151 539.7 428 63.3
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 2.0e-151 539.7 430 62.6
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.0e-151 539.7 435 62.1
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 2.7e-151 539.3 428 63.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 4.5e-151 538.5 429 63.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 5.9e-151 538.1 425 62.6
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.0e-150 537.3 430 62.3
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.3e-150 536.2 428 64.0
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 6.6e-150 534.6 431 62.9
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 8.6e-150 534.3 428 63.3
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.5e-149 533.5 424 63.2
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 2.5e-149 532.7 417 62.4
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 6.1e-148 528.1 430 63.0
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 6.1e-148 528.1 427 61.4
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.4e-147 526.9 425 61.4
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 4.0e-147 525.4 404 65.1
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 3.4e-146 522.3 448 60.0
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 9.8e-146 520.8 427 61.4
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 9.8e-146 520.8 439 62.0
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 9.2e-144 514.2 342 71.9
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.2e-143 513.8 425 60.7
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 2.0e-143 513.1 424 60.6
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.6e-143 511.9 438 59.1
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 6.4e-137 491.5 329 69.9
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 1.2e-135 487.3 390 63.1
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 1.7e-134 483.4 409 60.6
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.8e-131 473.4 395 59.2
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 2.0e-130 469.9 455 54.5
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.6e-130 469.5 422 59.0
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 3.2e-128 462.6 432 54.2
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.2e-127 460.7 409 57.7
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 1.2e-127 460.7 433 56.4
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.0e-126 456.1 411 57.7
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 3.3e-125 452.6 384 60.9
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 8.1e-124 448.0 410 58.3
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 3.1e-123 446.0 417 54.9
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 3.1e-123 446.0 401 55.9
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 6.4e-121 438.3 367 59.7
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.9e-118 429.1 426 54.2
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 8.1e-116 421.4 326 63.2
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 9.3e-112 407.9 429 54.5
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 3.6e-108 396.0 217 87.6
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 2.0e-106 390.2 262 70.6
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.5e-98 364.0 422 48.8
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.0e-94 351.3 365 49.3
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.3e-85 319.3 398 45.2
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 4.3e-85 319.3 320 52.2
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 3.7e-84 316.2 305 55.1
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 4.8e-84 315.8 411 42.6
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 2.6e-74 283.5 382 42.4
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 8.8e-70 268.5 308 47.1
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.7e-60 237.7 223 58.3
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-56 224.2 198 57.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.8e-54 217.6 128 77.3
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 2.3e-46 190.7 135 60.7
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.4e-45 186.4 167 53.9
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 1.2e-34 151.8 156 53.2
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 1.2e-29 135.2 90 66.7
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 1.7e-28 131.3 134 53.0
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 8.3e-28 129.0 82 76.8
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 4.6e-26 123.2 92 70.7
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.9e-26 122.9 124 54.0
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.9e-25 120.2 124 53.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 9.8e-21 105.5 92 57.6
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.3e-16 90.5 67 65.7
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 4.1e-11 73.6 124 41.1
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.1e-07 61.2 85 43.5


User provided reference genes

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