Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.7e-130 468.8 253 100.0
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 6.2e-119 431.0 253 90.5
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-118 429.9 253 89.3
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 4.0e-118 428.3 253 89.3
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 6.9e-118 427.6 253 88.9
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 4.5e-117 424.9 253 89.3
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 9.9e-117 423.7 251 89.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.7e-116 422.9 251 88.8
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.7e-116 422.9 251 88.8
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 2.2e-116 422.5 251 88.8
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.2e-116 422.5 251 88.8
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 2.2e-116 422.5 251 88.8
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 3.8e-116 421.8 251 88.4
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-115 419.9 253 87.4
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.2e-115 418.3 251 88.0
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 9.3e-115 417.2 251 88.0
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-114 416.8 251 87.6
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 4.6e-114 414.8 249 87.6
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 4.6e-114 414.8 249 87.6
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.5e-112 409.8 251 86.5
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 3.3e-112 408.7 251 86.9
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 6.2e-111 404.4 250 85.2
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 4.0e-110 401.7 253 82.6
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 4.0e-110 401.7 253 84.6
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.2e-109 400.2 253 82.2
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.2e-109 400.2 250 83.6
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.6e-109 399.1 253 82.2
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.6e-109 399.1 253 84.6
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 2.6e-109 399.1 253 81.4
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.5e-109 398.3 250 82.0
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.6e-109 397.5 253 83.8
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.3e-108 396.7 253 81.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.7e-108 396.4 253 82.2
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.7e-108 396.4 253 81.4
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.7e-108 396.4 253 82.2
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.7e-108 396.4 253 84.2
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.9e-108 395.6 253 83.4
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 4.9e-108 394.8 253 81.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 8.4e-108 394.0 253 80.6
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.4e-107 393.3 253 81.8
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.9e-107 392.9 253 80.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.4e-107 392.5 253 82.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.4e-107 392.5 253 81.4
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.2e-107 392.1 253 80.6
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.2e-107 392.1 253 80.2
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.2e-107 392.1 251 82.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.2e-107 391.7 253 80.6
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 5.5e-107 391.3 253 79.1
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.5e-107 391.3 253 80.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.3e-107 390.6 253 79.8
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 9.3e-107 390.6 251 82.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 9.3e-107 390.6 250 80.8
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.6e-106 389.8 253 79.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.6e-106 389.8 251 82.5
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.6e-106 389.8 253 81.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 3.5e-106 388.7 250 82.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 4.6e-106 388.3 253 79.1
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.6e-106 388.3 253 79.4
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 4.6e-106 388.3 251 81.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.0e-106 387.9 253 79.1
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 6.0e-106 387.9 253 80.2
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 7.9e-106 387.5 251 81.7
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.9e-106 387.5 253 79.4
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.0e-105 387.1 253 79.8
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.0e-105 387.1 253 81.0
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.0e-105 387.1 253 80.2
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.8e-105 386.3 250 81.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 2.3e-105 386.0 266 77.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.0e-105 385.6 241 84.2
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 3.9e-105 385.2 249 81.1
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 3.9e-105 385.2 251 81.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 5.1e-105 384.8 250 80.0
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 5.1e-105 384.8 250 80.8
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 8.7e-105 384.0 250 80.8
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 8.7e-105 384.0 251 79.3
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.1e-104 383.6 251 80.1
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.1e-104 383.6 251 81.3
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.5e-104 383.3 253 79.4
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.5e-104 382.5 250 80.0
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 7.4e-104 380.9 249 77.5
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.1e-103 379.4 251 78.5
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 2.1e-103 379.4 253 79.8
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.8e-103 379.0 251 80.1
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 3.7e-103 378.6 253 76.7
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 4.8e-103 378.3 249 77.9
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 4.8e-103 378.3 253 77.9
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 4.8e-103 378.3 253 78.7
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 6.2e-103 377.9 253 79.1
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.8e-102 376.3 251 77.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.4e-102 375.9 248 80.2
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 3.1e-102 375.6 251 77.7
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.1e-102 375.6 251 76.9
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 5.3e-102 374.8 249 77.1
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 7.6e-101 370.9 251 76.5
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.1e-99 367.1 250 76.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.1e-99 367.1 253 75.5
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.9e-99 366.3 253 75.1
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 9.3e-99 364.0 225 81.8
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.6e-98 363.2 253 73.9
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 3.5e-98 362.1 253 73.9
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.0e-97 360.5 253 76.7
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.3e-97 360.1 225 81.3
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.8e-97 359.8 248 76.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 5.1e-97 358.2 275 72.0
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.9e-96 356.3 274 72.6
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.5e-93 346.7 226 81.0
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.2e-92 342.8 253 69.2
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.9e-91 339.7 248 69.8
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.0e-89 332.4 252 68.3
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 8.7e-89 330.9 253 71.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.5e-88 330.1 253 66.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.4e-86 323.6 249 67.1
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.1e-86 320.9 248 64.5
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.1e-83 313.9 194 83.5
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.8e-81 306.6 187 83.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 5.1e-81 305.1 256 64.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.5e-64 250.4 177 71.2
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-62 244.2 250 51.6
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.2e-61 240.7 152 79.6
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.6e-58 229.2 253 57.7
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.3e-57 226.5 154 79.9
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 9.8e-56 221.1 149 77.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.6e-50 202.6 235 44.3
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 7.8e-45 184.9 241 41.9
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.0e-44 182.2 253 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.6e-40 169.9 233 42.9
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 2.6e-32 143.3 95 69.5
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.4e-32 142.9 239 36.8
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 7.5e-32 141.7 96 76.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-28 131.0 77 85.7
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 7.3e-27 125.2 119 60.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.7e-26 122.5 75 81.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 4.4e-24 115.9 235 36.2
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 4.1e-22 109.4 100 59.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.2e-08 64.7 72 52.8


User provided reference genes

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