Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-139 500.0 267 100.0
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.6e-125 453.0 264 90.2
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.6e-119 430.6 253 89.3
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 8.6e-119 430.6 264 85.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 4.2e-118 428.3 264 84.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 7.2e-118 427.6 262 85.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 9.5e-118 427.2 264 84.1
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 2.1e-117 426.0 262 85.1
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-116 423.7 273 82.8
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.0e-116 423.7 273 82.8
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.4e-116 423.3 273 82.8
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 262 84.7
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 273 82.8
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.4e-116 423.3 273 82.8
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.8e-116 422.9 264 83.7
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 262 84.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-115 420.2 262 84.0
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 7.5e-115 417.5 260 83.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 7.5e-115 417.5 260 83.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 6.3e-114 414.5 267 80.5
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.8e-113 412.9 267 80.1
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.0e-113 411.0 265 79.6
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-112 410.2 262 82.8
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.0e-112 409.5 265 80.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.7e-112 409.1 262 81.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 2.7e-112 409.1 265 80.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 7.8e-112 407.5 265 81.1
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.0e-111 407.1 265 79.2
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.3e-111 406.8 265 80.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.3e-111 406.0 267 79.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.9e-111 405.6 265 79.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 2.9e-111 405.6 262 80.5
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 8.6e-111 404.1 266 79.3
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.1e-110 403.7 265 79.6
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.5e-110 403.3 267 77.5
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.9e-110 402.9 265 78.1
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.5e-110 402.5 265 78.1
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.3e-110 402.1 265 77.7
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 5.6e-110 401.4 262 80.5
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.3e-110 401.0 265 79.2
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 9.5e-110 400.6 265 80.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.2e-109 400.2 265 79.2
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-109 400.2 265 77.0
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 1.2e-109 400.2 265 78.1
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.1e-109 399.4 265 77.4
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.1e-109 399.4 267 77.9
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 2.1e-109 399.4 262 78.2
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.1e-109 399.4 265 78.5
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.8e-109 399.1 263 79.5
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.7e-109 398.3 261 78.9
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 4.7e-109 398.3 263 78.7
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 8.0e-109 397.5 251 84.1
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 8.0e-109 397.5 265 79.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.4e-108 396.7 265 78.5
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.3e-108 396.0 267 76.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 2.3e-108 396.0 263 77.2
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.1e-108 395.6 265 76.6
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 3.1e-108 395.6 265 79.2
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 6.8e-108 394.4 262 78.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 6.8e-108 394.4 265 77.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.5e-107 393.3 266 78.2
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 2.0e-107 392.9 262 78.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.4e-107 392.1 265 76.2
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.4e-107 392.1 266 76.7
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 4.4e-107 391.7 259 78.4
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 4.4e-107 391.7 278 75.2
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 7.5e-107 391.0 265 76.6
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.3e-106 390.2 262 77.1
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 2.2e-106 389.4 262 77.1
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.2e-106 389.4 261 77.4
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 2.2e-106 389.4 255 78.8
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 3.7e-106 388.7 261 74.7
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 3.7e-106 388.7 264 77.3
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 4.9e-106 388.3 259 78.8
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 4.9e-106 388.3 263 76.4
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.4e-105 386.7 262 76.7
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.9e-105 386.3 262 77.5
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.4e-105 386.0 253 81.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 3.2e-105 385.6 261 76.2
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 5.4e-105 384.8 265 76.6
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 7.0e-105 384.4 262 75.2
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.6e-104 383.3 259 76.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.6e-104 383.3 263 76.0
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.7e-104 382.5 263 75.3
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.6e-104 381.7 264 73.9
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 7.8e-104 380.9 261 76.2
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 7.8e-104 380.9 270 73.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.3e-103 380.2 263 75.7
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.3e-103 379.4 263 75.7
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.3e-103 379.4 250 79.2
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 3.9e-103 378.6 263 73.0
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 3.9e-103 378.6 254 78.3
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.9e-103 378.6 266 76.3
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.9e-102 376.3 263 74.9
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.2e-101 373.6 241 82.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 8.1e-101 370.9 287 71.1
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.8e-100 369.8 259 73.4
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 3.1e-100 369.0 259 73.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 5.2e-100 368.2 268 71.3
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 6.8e-100 367.9 288 70.5
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.8e-99 364.8 260 75.0
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.4e-97 359.4 225 82.2
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 3.5e-96 355.5 257 72.8
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.6e-96 355.1 253 73.1
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.8e-96 354.4 266 68.0
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.3e-95 352.8 225 81.3
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 6.6e-95 351.3 238 78.2
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.6e-93 345.5 265 70.6
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 6.2e-93 344.7 249 70.7
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 5.2e-92 341.7 266 66.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.8e-92 341.3 264 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.0e-87 325.9 253 65.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.6e-87 324.7 253 66.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.5e-83 313.5 265 65.7
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.7e-79 300.1 187 83.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.9e-78 296.6 256 62.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-64 249.2 258 51.2
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.9e-62 243.4 177 70.6
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.8e-61 238.8 265 55.1
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 3.8e-58 229.2 152 78.9
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.5e-57 226.5 161 74.5
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.1e-55 218.8 154 77.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.7e-48 196.4 235 44.7
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.7e-46 188.7 265 46.8
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.6e-43 179.9 250 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.2e-41 172.6 233 43.3
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 7.2e-33 145.2 239 37.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 6.7e-31 138.7 98 70.4
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.7e-30 134.8 96 75.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.4e-28 131.0 77 84.4
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.0e-26 122.5 75 80.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 8.5e-26 121.7 116 59.5
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.7e-21 107.5 233 33.5
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.8e-21 106.7 100 57.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.5e-09 67.0 72 54.2


User provided reference genes

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