Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 3.7e-137 491.5 242 100.0
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 3.9e-110 401.7 240 85.4
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 5.0e-110 401.4 240 85.0
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 1.1e-107 393.7 222 88.3
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 5.2e-107 391.3 222 87.8
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 7.5e-106 387.5 240 82.9
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 1.7e-105 386.3 223 87.4
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 3.7e-105 385.2 223 87.0
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 1.9e-104 382.9 224 87.1
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 4.1e-104 381.7 226 85.0
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 5.4e-104 381.3 223 87.0
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 5.4e-104 381.3 223 87.0
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 6.0e-103 377.9 224 86.2
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.9e-101 372.9 240 77.1
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.6e-98 362.5 230 78.7
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 7.6e-98 360.9 240 73.3
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 4.9e-97 358.2 240 72.9
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 2.4e-96 355.9 240 74.6
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.4e-96 355.9 240 72.9
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 5.4e-96 354.8 240 74.6
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 9.2e-96 354.0 227 74.9
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 1.2e-95 353.6 238 72.3
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 2.7e-95 352.4 237 73.4
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.5e-95 352.1 238 72.3
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 7.8e-95 350.9 215 78.6
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.0e-94 350.5 227 75.3
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 1.0e-94 350.5 227 75.3
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.7e-94 349.7 238 71.4
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 3.9e-94 348.6 225 75.6
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 5.1e-94 348.2 240 70.8
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 8.6e-94 347.4 240 70.8
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 1.1e-93 347.1 240 71.2
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 1.1e-93 347.1 227 74.4
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 1.9e-93 346.3 226 74.3
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 1.9e-93 346.3 227 74.4
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 3.3e-93 345.5 226 74.8
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 3.3e-93 345.5 238 72.3
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 9.6e-93 344.0 224 74.1
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.2e-92 343.6 265 67.2
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 2.1e-92 342.8 225 76.0
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 2.1e-92 342.8 226 71.7
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 8.1e-92 340.9 259 66.8
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 8.1e-92 340.9 259 66.8
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 1.8e-91 339.7 225 76.0
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 2.4e-91 339.3 213 75.6
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 4.0e-91 338.6 225 76.0
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 4.0e-91 338.6 225 76.0
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 4.0e-91 338.6 222 74.8
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 6.8e-91 337.8 225 72.9
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 8.9e-91 337.4 239 69.9
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.2e-90 337.0 240 70.4
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.5e-90 336.7 225 75.6
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 1.5e-90 336.7 227 72.2
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 2.6e-90 335.9 225 72.9
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.4e-90 335.5 225 75.1
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 7.6e-90 334.3 224 74.1
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 9.9e-90 334.0 240 68.8
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 1.3e-89 333.6 211 76.8
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 1.7e-89 333.2 218 72.0
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 3.8e-89 332.0 232 69.8
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 4.9e-89 331.6 224 71.4
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 6.4e-89 331.3 223 71.3
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 6.4e-89 331.3 226 71.2
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 8.4e-89 330.9 220 71.4
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 1.1e-88 330.5 225 73.8
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 1.4e-88 330.1 213 72.8
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 3.2e-88 328.9 227 70.5
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 9.3e-88 327.4 224 70.5
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 1.6e-87 326.6 244 66.4
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 7.8e-87 324.3 225 70.7
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 7.8e-87 324.3 215 74.0
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.3e-86 323.6 226 70.4
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.7e-86 323.2 213 73.7
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.7e-86 323.2 256 63.7
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 3.9e-86 322.0 220 71.4
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 5.1e-86 321.6 226 68.6
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 8.7e-86 320.9 215 72.1
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.5e-85 320.1 199 77.4
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 7.3e-85 317.8 226 69.0
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 2.1e-84 316.2 213 73.7
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.1e-83 313.9 237 67.1
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 2.4e-83 312.8 237 67.5
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 6.9e-83 311.2 218 70.6
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 2.0e-82 309.7 221 69.2
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 5.8e-82 308.1 211 68.2
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 6.4e-81 304.7 219 64.4
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 1.6e-79 300.1 211 71.6
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 2.7e-79 299.3 213 71.4
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 4.3e-77 292.0 241 63.1
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 9.6e-77 290.8 226 64.6
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 1.5e-74 283.5 212 63.2
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 6.9e-67 258.1 213 59.2
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 9.0e-67 257.7 220 57.3
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.2e-66 257.3 164 73.8
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 1.0e-62 244.2 216 55.6
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 8.4e-57 224.6 172 64.5
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 4.3e-53 212.2 145 71.0
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 5.7e-53 211.8 159 66.0
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 9.7e-53 211.1 211 48.3
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 1.4e-51 207.2 148 68.9
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.1e-51 206.1 139 74.1
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 4.1e-51 205.7 214 49.1
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 2.2e-49 199.9 191 49.2
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 5.0e-49 198.7 158 67.1
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 3.6e-47 192.6 165 60.6
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.8e-43 180.3 152 65.1
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 3.4e-42 176.0 123 67.5
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 6.5e-41 171.8 138 61.6
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 1.8e-38 163.7 113 71.7
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 5.0e-33 145.6 98 69.4
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.0e-29 133.7 81 77.8
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.0e-29 133.7 81 77.8
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.0e-22 111.3 90 62.2
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 3.5e-18 96.3 82 57.3
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 2.9e-17 93.2 222 27.9
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 1.0e-09 68.2 124 27.4
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 1.3e-09 67.8 50 70.0
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 3.3e-08 63.2 42 64.3
Cre12.g527850 Chlamydomonas reinhardtii HOM05D006384 ORTHO05D007917 1.2e-07 61.2 198 23.2
MCO04G452 Micromonas commoda HOM05D006384 ORTHO05D007917 2.1e-07 60.5 203 24.1
PGR119G1921 Punica granatum HOM05D005250 ORTHO05D006342 1.0e-06 58.2 229 21.4
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 4.0e-06 56.2 67 49.3
Atru.chr11.1561 Acer truncatum HOM05D005250 ORTHO05D006342 6.8e-06 55.5 169 24.3
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 8.9e-06 55.1 48 60.4


User provided reference genes

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