Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.8e-134 481.5 239 100.0
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.6e-108 396.4 242 84.3
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.0e-106 389.4 241 83.4
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.2e-100 370.2 240 78.8
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 3.3e-98 362.1 240 75.8
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 8.2e-97 357.5 240 79.2
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.1e-96 357.1 270 70.0
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 5.3e-96 354.8 267 71.5
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 4.5e-95 351.7 240 78.3
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 4.5e-95 351.7 240 78.3
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.8e-94 348.6 240 77.9
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 4.2e-93 345.1 239 76.2
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 5.5e-93 344.7 244 72.1
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.1e-92 342.8 239 76.2
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 2.2e-89 332.8 240 71.2
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.1e-88 328.6 248 71.0
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 7.0e-88 327.8 240 70.8
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.2e-87 327.0 240 68.8
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.6e-87 326.6 241 69.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 2.0e-87 326.2 240 69.6
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 2.7e-87 325.9 244 69.7
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 2.7e-87 325.9 242 68.6
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 3.5e-87 325.5 249 70.3
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.8e-86 322.0 241 70.1
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.8e-86 322.0 241 69.7
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.8e-86 322.0 241 69.7
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 3.8e-86 322.0 241 69.7
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 5.0e-86 321.6 243 70.4
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.1e-85 320.5 241 69.7
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.5e-85 320.1 239 67.4
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.5e-85 320.1 245 66.9
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 5.5e-85 318.2 239 69.0
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.4e-83 313.5 245 66.9
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.4e-83 313.5 245 69.0
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.8e-83 313.2 239 67.4
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.3e-83 312.8 247 66.4
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.3e-83 312.8 243 68.3
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.0e-83 312.4 239 69.0
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 4.0e-83 312.0 260 62.7
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 5.2e-83 311.6 243 67.9
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 1.5e-82 310.1 241 66.8
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 2.6e-82 309.3 237 69.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 2.6e-82 309.3 242 68.6
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 9.8e-82 307.4 246 65.0
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.7e-81 306.6 243 68.7
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 2.2e-81 306.2 252 66.3
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.7e-81 305.4 244 64.3
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 8.3e-81 304.3 240 70.0
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.7e-79 299.3 242 63.6
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 7.8e-79 297.7 240 65.4
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.0e-78 297.4 288 58.3
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.7e-78 296.6 239 63.2
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 2.3e-78 296.2 217 69.1
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.3e-78 296.2 240 66.7
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 8.6e-78 294.3 242 64.9
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.6e-78 294.3 242 64.9
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 1.1e-77 293.9 258 61.6
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.9e-77 293.1 242 64.5
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.3e-77 292.0 240 65.0
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.3e-77 292.0 240 65.0
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 5.6e-77 291.6 249 63.5
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.6e-77 291.6 246 64.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.6e-77 291.6 246 64.2
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 7.3e-77 291.2 243 61.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.6e-76 290.0 243 61.3
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.1e-76 289.7 221 64.7
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 6.1e-76 288.1 241 61.4
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 1.4e-75 287.0 211 65.9
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.3e-75 286.2 249 60.2
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 4.0e-75 285.4 245 62.9
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 5.2e-75 285.0 219 65.3
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 8.9e-75 284.3 251 62.2
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.5e-74 283.5 243 61.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.6e-74 282.7 243 63.4
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 3.4e-74 282.3 246 61.0
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 4.4e-74 282.0 243 61.7
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 4.4e-74 282.0 243 61.7
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 4.4e-74 282.0 243 59.7
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 7.5e-74 281.2 223 63.2
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 9.8e-74 280.8 242 62.0
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 1.7e-73 280.0 223 62.8
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 2.9e-73 279.3 247 60.3
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 8.3e-73 277.7 210 63.8
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.4e-72 276.2 241 60.6
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 7.0e-72 274.6 245 60.4
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 9.2e-72 274.2 257 59.5
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 4.6e-71 271.9 160 76.9
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.3e-70 270.4 252 60.3
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.3e-70 270.4 252 60.3
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.7e-70 270.0 245 57.1
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.0e-70 269.2 248 60.9
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 3.0e-70 269.2 288 54.2
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.1e-69 267.3 163 77.3
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 9.5e-69 264.2 248 57.7
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 9.5e-69 264.2 245 55.1
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 5.4e-64 248.4 257 54.9
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 3.3e-61 239.2 168 69.0
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 7.3e-61 238.0 192 69.8
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.6e-60 236.9 239 56.9
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 1.2e-58 230.7 163 71.2
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.3e-54 217.2 244 54.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 3.0e-54 216.1 190 55.8
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 3.9e-54 215.7 189 63.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.9e-53 213.4 261 47.1
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.2e-52 210.7 110 88.2
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.6e-52 210.3 132 75.8
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.8e-51 206.8 234 47.4
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 5.4e-48 195.3 184 56.0
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 5.4e-48 195.3 131 71.0
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.1e-45 187.6 165 58.2
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.7e-41 173.7 90 90.0
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 5.6e-37 158.7 152 59.9
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 5.4e-32 142.1 82 82.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 4.6e-31 139.0 111 61.3
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 1.5e-29 134.0 94 70.2
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 8.1e-28 128.3 114 62.3
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.4e-27 127.5 154 47.4
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 3.3e-21 106.3 56 89.3
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.4e-19 100.1 68 73.5
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 6.9e-19 98.6 50 88.0
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.2e-16 89.7 65 56.9
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 6.7e-14 82.0 38 89.5
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 2.5e-08 63.5 31 87.1
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 56.2 98 46.9
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 5.1e-06 55.8 38 57.9
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 8.8e-06 55.1 36 58.3


User provided reference genes

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