Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.2e-116 423.3 229 100.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.3e-78 297.0 230 76.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.8e-78 295.8 232 75.4
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 9.1e-77 290.8 231 74.9
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 3.5e-76 288.9 231 73.6
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 7.7e-76 287.7 230 75.2
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 3.6e-73 278.9 233 73.0
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 3.6e-73 278.9 233 73.0
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 4.7e-73 278.5 232 72.4
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 6.1e-73 278.1 233 73.0
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.0e-72 277.3 232 72.0
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.9e-72 275.4 232 69.0
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.8e-69 266.5 230 71.3
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.0e-56 222.6 210 62.4
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.1e-53 212.6 212 58.5
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 7.0e-53 211.5 212 58.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 7.0e-53 211.5 212 58.0
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.6e-52 210.3 230 58.7
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.0e-52 209.9 230 55.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 7.7e-52 208.0 226 56.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.3e-51 207.2 210 58.6
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.3e-51 207.2 208 59.1
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.3e-51 206.5 179 65.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.9e-51 206.1 223 57.8
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.9e-51 206.1 214 57.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 6.6e-51 204.9 229 56.8
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.1e-50 204.1 205 61.5
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.1e-50 204.1 211 57.3
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.9e-50 203.4 243 53.5
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 5.5e-50 201.8 211 57.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 7.2e-50 201.4 239 54.0
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 7.2e-50 201.4 235 55.7
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 7.2e-50 201.4 211 56.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 9.5e-50 201.1 245 52.7
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 9.5e-50 201.1 239 54.4
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.1e-49 199.9 159 69.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.8e-49 199.5 232 54.3
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.8e-49 199.5 222 54.5
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 2.8e-49 199.5 212 57.5
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.7e-49 198.7 179 63.1
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 4.7e-49 198.7 242 53.7
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 4.7e-49 198.7 226 55.8
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 6.1e-49 198.4 222 54.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 8.0e-49 198.0 212 56.6
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-48 197.2 241 52.7
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.4e-48 197.2 234 55.1
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.8e-48 196.8 232 55.6
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.3e-48 196.4 231 54.1
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.3e-48 196.4 249 53.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.3e-48 196.4 241 54.4
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 2.3e-48 196.4 233 55.4
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 2.3e-48 196.4 205 58.5
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 3.0e-48 196.1 179 62.0
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.0e-48 196.1 240 55.0
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 4.0e-48 195.7 256 50.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 5.2e-48 195.3 205 57.1
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 6.8e-48 194.9 201 57.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 6.8e-48 194.9 201 57.2
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 6.8e-48 194.9 235 54.0
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.8e-48 194.9 179 62.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 8.9e-48 194.5 225 54.7
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.2e-47 194.1 232 53.9
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.2e-47 194.1 179 62.0
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.0e-47 193.4 179 62.0
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.6e-47 193.0 241 53.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.4e-47 192.6 229 55.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.4e-47 192.6 229 55.9
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.4e-47 192.2 228 50.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 5.7e-47 191.8 227 53.7
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 9.8e-47 191.0 229 56.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 3.7e-46 189.1 231 52.4
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.3e-46 188.3 205 55.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.8e-45 186.8 179 62.6
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 4.1e-45 185.7 224 52.7
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 7.0e-45 184.9 222 53.2
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 9.2e-45 184.5 179 60.9
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 9.2e-45 184.5 204 54.4
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.0e-44 183.3 225 52.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.0e-44 183.3 206 54.9
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.7e-44 183.0 228 50.9
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 7.8e-44 181.4 243 49.4
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.3e-43 180.6 214 54.2
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.3e-43 180.6 278 47.8
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.9e-43 179.1 202 55.0
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 3.9e-43 179.1 238 51.7
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.9e-43 179.1 153 65.4
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.1e-42 177.6 225 52.4
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.1e-42 177.6 223 52.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.9e-42 176.8 209 53.1
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.5e-42 176.4 215 51.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 4.3e-42 175.6 140 67.9
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.3e-42 175.6 208 53.8
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.6e-42 175.3 179 58.7
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.6e-42 175.3 208 53.8
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 9.5e-42 174.5 208 53.4
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.5e-42 174.5 208 53.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-41 174.1 237 51.1
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.6e-41 173.7 186 54.8
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.6e-41 172.6 190 53.2
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.8e-40 170.2 171 55.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.1e-40 169.5 229 51.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-39 166.8 146 69.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.4e-39 165.6 226 48.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 7.5e-39 164.9 233 47.6
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 3.2e-37 159.5 223 48.9
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 5.4e-37 158.7 153 56.9
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 2.0e-36 156.8 106 81.1
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.1e-34 151.0 106 77.4
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 9.5e-34 147.9 192 52.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.2e-33 147.5 153 57.5
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.7e-27 127.1 208 46.6
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 6.6e-27 125.2 151 47.7
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 8.6e-27 124.8 142 53.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.9e-26 123.6 169 48.5
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.5e-26 123.2 204 44.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.6e-26 122.1 216 41.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 5.6e-26 122.1 103 60.2
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.6e-25 119.4 190 39.5
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 4.7e-25 119.0 149 47.7
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 4.0e-24 115.9 116 60.3
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-21 107.8 81 75.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.6e-20 104.0 172 45.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.6e-17 92.8 102 50.0
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 4.9e-14 82.4 157 36.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.8e-07 58.9 93 45.2


User provided reference genes

Program Settings