Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.4e-248 861.7 420 100.0
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.7e-161 573.2 428 69.4
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.2e-161 572.8 428 68.9
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.2e-154 550.4 430 66.0
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.3e-153 547.0 415 66.7
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.3e-153 547.0 415 66.7
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 2.2e-153 546.2 431 66.4
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 9.2e-152 540.8 412 66.3
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 4.6e-151 538.5 435 65.1
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 5.1e-150 535.0 427 63.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.5e-149 533.5 423 66.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.9e-145 519.2 413 63.9
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 5.4e-144 515.0 413 63.0
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 2.3e-142 509.6 423 62.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.1e-139 500.7 412 63.1
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.9e-125 453.4 442 53.2
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 9.6e-125 451.1 442 52.5
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.3e-116 424.1 440 51.1
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 8.2e-116 421.4 453 49.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.6e-114 416.4 454 46.0
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.0e-113 414.5 455 48.1
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.3e-113 414.1 448 48.9
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 5.0e-113 412.1 454 46.0
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 8.5e-113 411.4 454 46.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.2e-112 409.5 458 48.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 9.3e-112 407.9 462 49.6
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-111 407.5 458 48.5
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.6e-111 407.1 443 49.2
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 6.1e-111 405.2 460 49.6
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 5.1e-110 402.1 448 48.2
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.7e-110 401.7 460 48.7
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.9e-109 400.2 454 47.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.5e-109 399.8 453 45.7
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.3e-109 399.1 455 48.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 1.3e-108 397.5 450 49.8
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.3e-108 397.5 445 48.3
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.7e-108 397.1 448 47.1
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 2.2e-108 396.7 446 47.3
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.9e-107 391.7 449 47.2
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.0e-105 387.9 449 46.5
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.0e-105 387.9 445 47.0
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-104 384.4 458 46.1
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.9e-104 383.6 455 46.8
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.2e-104 382.5 454 45.8
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.2e-103 380.9 456 46.7
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.2e-103 380.9 456 46.7
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.7e-103 379.8 438 47.0
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.4e-102 377.5 440 46.8
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.0e-102 376.3 453 46.8
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.9e-102 375.9 444 45.7
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 8.8e-102 374.8 443 47.9
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 8.8e-102 374.8 441 46.3
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.1e-101 374.4 436 46.1
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 2.0e-101 373.6 430 47.4
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 3.3e-101 372.9 446 43.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 4.4e-101 372.5 440 45.0
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 9.7e-101 371.3 430 47.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.3e-100 370.9 443 46.5
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.8e-100 369.8 465 43.4
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.1e-99 367.9 463 43.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.4e-99 367.5 439 43.7
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.8e-99 367.1 456 43.2
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.8e-99 367.1 462 46.5
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.4e-99 366.7 468 42.1
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 4.1e-99 365.9 441 47.2
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 4.1e-99 365.9 463 43.2
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 5.3e-99 365.5 459 43.6
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 9.1e-99 364.8 451 44.3
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.6e-98 363.2 443 46.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.4e-98 362.8 445 46.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 4.5e-98 362.5 460 42.4
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.9e-97 359.8 443 46.7
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 5.0e-97 359.0 455 45.7
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 6.5e-97 358.6 439 43.1
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.5e-96 356.7 435 45.5
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.2e-96 356.3 443 46.5
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 5.5e-96 355.5 453 45.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 3.0e-94 349.7 446 43.0
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.1e-93 347.8 440 45.0
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.1e-93 347.8 447 42.3
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 2.6e-93 346.7 452 44.0
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 4.8e-92 342.4 462 42.0
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.4e-91 340.1 454 41.9
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 5.0e-89 332.4 425 42.4
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.5e-88 328.9 444 41.4
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 4.7e-87 325.9 450 39.6
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 1.0e-86 324.7 446 40.1
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 4.8e-84 315.8 292 52.7
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 8.2e-84 315.1 425 42.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.8e-81 306.2 452 39.4
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 4.2e-80 302.8 448 39.3
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 6.1e-79 298.9 483 39.8
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.8e-78 295.0 421 39.0
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.8e-76 290.0 412 40.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.7e-74 283.5 424 38.9
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 4.5e-74 282.7 403 41.4
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 7.2e-72 275.4 344 43.0
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.3e-64 250.0 426 35.7
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.2e-60 237.3 276 43.8
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.1e-59 233.0 312 42.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 7.0e-59 232.3 482 33.4
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 8.6e-57 225.3 251 47.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.9e-51 207.6 319 38.2
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 5.6e-48 196.1 515 29.7
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 2.9e-44 183.7 305 39.7
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 4.1e-43 179.9 225 45.8
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 3.5e-42 176.8 268 40.3
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 2.5e-40 170.6 452 27.2
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 2.5e-40 170.6 365 31.8
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 6.9e-30 136.0 190 42.1
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.2e-26 125.2 124 49.2
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.0e-25 122.1 102 53.9
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 6.9e-22 109.4 427 24.6
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 3.0e-17 94.0 286 28.0
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.9e-16 91.3 79 51.9
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.5e-13 81.6 143 36.4
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.6e-13 80.9 74 54.1
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 3.4e-13 80.5 87 47.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.3e-12 78.6 89 40.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.9e-11 74.7 129 38.8
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.6e-07 61.6 98 41.8
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.0e-06 57.0 147 29.9


User provided reference genes

Program Settings