Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.6e-132 476.1 238 100.0
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 9.8e-66 254.2 238 63.9
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.1e-64 250.8 236 62.7
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 5.4e-64 248.4 239 66.9
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 3.5e-63 245.7 243 65.4
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 1.7e-62 243.4 239 64.4
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 3.6e-60 235.7 239 63.6
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 3.1e-59 232.6 238 59.2
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 3.1e-59 232.6 238 59.2
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 2.6e-58 229.6 236 59.3
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 1.7e-57 226.9 238 58.0
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 6.4e-57 224.9 238 59.2
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 6.0e-55 218.4 241 58.5
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.0e-54 216.1 236 57.6
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 3.7e-49 199.1 244 57.8
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.2e-47 194.1 255 51.4
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.6e-47 193.7 248 54.4
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 7.8e-47 191.4 255 49.8
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 6.6e-46 188.3 250 50.4
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 4.3e-45 185.7 182 61.0
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 7.3e-45 184.9 243 55.1
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.2e-44 184.1 236 50.0
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 2.1e-44 183.3 249 51.8
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 2.1e-44 183.3 254 49.6
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 4.7e-44 182.2 249 51.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 8.1e-44 181.4 256 48.4
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 8.1e-44 181.4 247 49.0
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 8.1e-44 181.4 248 48.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 8.1e-44 181.4 248 48.0
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.1e-43 181.0 252 50.8
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.1e-43 181.0 249 51.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.1e-43 179.5 245 50.6
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 4.0e-43 179.1 249 51.4
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 6.8e-43 178.3 243 49.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.5e-42 177.2 254 48.8
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 2.6e-42 176.4 256 46.5
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 2.6e-42 176.4 255 48.2
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 1.3e-41 174.1 246 48.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.4e-41 171.8 245 49.8
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 6.4e-41 171.8 244 48.8
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 8.3e-41 171.4 248 46.8
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.1e-40 168.3 245 46.5
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.2e-39 167.5 254 46.1
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 1.6e-39 167.2 276 44.6
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 4.6e-39 165.6 237 46.4
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.6e-39 165.6 251 47.4
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 7.8e-39 164.9 250 46.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 1.3e-38 164.1 247 46.2
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.3e-38 163.3 251 47.0
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 3.0e-38 162.9 252 46.8
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 3.0e-38 162.9 250 46.8
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 3.0e-38 162.9 237 46.4
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 8.6e-38 161.4 249 47.0
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.9e-37 160.2 245 46.9
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.9e-37 160.2 251 47.0
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.9e-37 160.2 251 47.0
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.9e-37 160.2 247 46.2
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.3e-37 159.5 256 46.1
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 3.3e-37 159.5 245 46.1
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 4.3e-37 159.1 248 46.4
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 3.6e-36 156.0 260 44.6
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 8.1e-36 154.8 239 46.0
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.4e-35 154.1 240 44.2
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.2e-34 151.0 247 45.3
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.2e-34 151.0 254 44.5
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 4.4e-34 149.1 249 45.0
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 3.8e-33 146.0 261 42.5
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 6.4e-33 145.2 253 45.1
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 8.4e-33 144.8 258 42.6
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.4e-32 144.1 235 42.6
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.4e-32 144.1 256 43.0
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.9e-32 143.7 241 42.3
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 5.4e-32 142.1 253 43.5
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 5.4e-32 142.1 237 41.4
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 1.2e-31 141.0 267 41.9
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.2e-31 141.0 253 43.9
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.2e-31 141.0 253 43.5
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.6e-31 140.6 244 45.9
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.7e-31 139.8 243 44.4
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.5e-31 139.4 243 42.8
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.5e-29 134.0 272 41.9
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 9.6e-29 131.3 258 43.0
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 2.8e-28 129.8 249 42.6
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.8e-28 129.8 246 41.1
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.1e-27 127.9 255 42.4
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.8e-27 127.1 258 40.7
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 6.9e-27 125.2 238 43.7
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.6e-26 123.2 150 52.0
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.6e-26 123.2 255 40.0
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 4.4e-26 122.5 273 37.4
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 5.8e-26 122.1 263 42.6
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.2e-25 120.2 171 49.1
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 2.4e-24 116.7 265 37.0
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 3.2e-24 116.3 236 42.4
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 3.2e-24 116.3 262 40.1
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 5.4e-24 115.5 257 39.7
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 3.5e-23 112.8 241 38.6
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.5e-21 107.5 178 44.9
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 7.3e-21 105.1 230 39.1
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 8.1e-20 101.7 277 35.0
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.4e-19 100.9 229 38.0
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 4.9e-17 92.4 228 36.4
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 6.4e-17 92.0 173 43.4
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 9.3e-16 88.2 185 41.1
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 7.9e-15 85.1 80 60.0
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 7.9e-15 85.1 255 33.3
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 6.7e-14 82.0 73 60.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 5.6e-13 79.0 76 59.2
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 7.4e-13 78.6 135 46.7
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 2.1e-12 77.0 94 48.9
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.4e-11 74.3 107 50.5
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 4.5e-10 69.3 69 53.6
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 4.5e-10 69.3 69 53.6
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 1.7e-09 67.4 63 57.1
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 2.2e-09 67.0 67 53.7
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 6.4e-09 65.5 64 56.2
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 8.4e-09 65.1 133 36.1
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.1e-08 64.7 191 32.5
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.9e-08 63.9 193 32.1
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-07 60.5 64 53.1
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 1.0e-06 58.2 193 31.1
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 3.9e-06 56.2 47 61.7
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 3.9e-06 56.2 41 70.7
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 6.7e-06 55.5 43 62.8
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 6.7e-06 55.5 43 62.8


User provided reference genes

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