Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G19390 Aethionema arabicum HOM05D001326 ORTHO05D004163 1.1e-62 243.4 149 100.0
AL1G53320 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 5.6e-11 71.6 83 49.4
Sp1g34320 Schrenkiella parvula HOM05D001326 ORTHO05D004163 9.6e-11 70.9 83 50.6
A10p06640 Brassica napus HOM05D001326 ORTHO05D004163 1.3e-10 70.5 83 49.4
BraA10t42922Z Brassica rapa HOM05D001326 ORTHO05D004163 1.3e-10 70.5 83 49.4
Aa31LG5G18920 Aethionema arabicum HOM05D001326 ORTHO05D004163 2.8e-10 69.3 88 46.6
BcaB07g33854 Brassica carinata HOM05D001326 ORTHO05D004163 3.7e-10 68.9 83 47.0
BcaC08g42930 Brassica carinata HOM05D001326 ORTHO05D004163 3.7e-10 68.9 83 48.2
C06p01670 Brassica napus HOM05D001326 ORTHO05D004163 3.7e-10 68.9 83 48.2
BolC6t35298H Brassica oleracea HOM05D001326 ORTHO05D004163 3.7e-10 68.9 83 48.2
Thhalv10011812m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 3.7e-10 68.9 83 49.4
A08p05940 Brassica napus HOM05D001326 ORTHO05D004163 8.1e-10 67.8 83 47.0
BraA08t32595Z Brassica rapa HOM05D001326 ORTHO05D004163 8.1e-10 67.8 83 47.0
AT1G47200 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 1.4e-09 67.0 83 49.4
BcaC07g37236 Brassica carinata HOM05D001326 ORTHO05D004163 1.4e-09 67.0 83 47.0
C08p06600 Brassica napus HOM05D001326 ORTHO05D004163 1.4e-09 67.0 83 47.0
BolC8t47503H Brassica oleracea HOM05D001326 ORTHO05D004163 1.4e-09 67.0 83 47.0
CARHR036740 Cardamine hirsuta HOM05D001326 ORTHO05D004163 2.4e-09 66.2 83 47.0
Lalb_Chr23g0267351 Lupinus albus HOM05D001326 ORTHO05D004163 4.0e-09 65.5 99 37.4
BcaB04g17546 Brassica carinata HOM05D001326 ORTHO05D004163 5.3e-09 65.1 83 45.8
AL47U10010 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 9.0e-09 64.3 88 40.9
AL8G17650 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 9.0e-09 64.3 88 40.9
Carub.0001s3596 Capsella rubella HOM05D001326 ORTHO05D004163 9.0e-09 64.3 114 40.4
Gohir.D01G109000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 9.0e-09 64.3 83 41.0
Gorai.002G133200 Gossypium raimondii HOM05D001326 ORTHO05D004163 9.0e-09 64.3 83 41.0
AT5G43070 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 1.5e-08 63.5 99 37.4
Peaxi162Scf00219g00123 Petunia axillaris HOM05D001326 ORTHO05D004163 1.5e-08 63.5 102 37.3
CARHR180920 Cardamine hirsuta HOM05D001326 ORTHO05D004163 2.0e-08 63.2 83 41.0
Nitab4.5_0000569g0170 Nicotiana tabacum HOM05D001326 ORTHO05D004163 2.6e-08 62.8 99 37.4
Glyma.14G086900 Glycine max HOM05D001326 ORTHO05D004163 3.4e-08 62.4 106 35.8
Gohir.A05G206500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 5.8e-08 61.6 83 41.0
THA.LOC104814178 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 5.8e-08 61.6 83 45.8
Atru.chr13.770 Acer truncatum HOM05D001326 ORTHO05D004163 7.6e-08 61.2 97 37.1
MSTRG.22238 Avicennia marina HOM05D001326 ORTHO05D004163 7.6e-08 61.2 83 44.6
Gohir.D05G210000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 7.6e-08 61.2 83 41.0
Gorai.009G216400 Gossypium raimondii HOM05D001326 ORTHO05D004163 7.6e-08 61.2 83 41.0
Psat6g014240 Pisum sativum HOM05D001326 ORTHO05D004163 7.6e-08 61.2 83 41.0
THA.LOC104820501 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 9.9e-08 60.8 83 44.6
Duzib093G0342 Durio zibethinus HOM05D001326 ORTHO05D004163 1.3e-07 60.5 83 41.0
Glyma.04G043200 Glycine max HOM05D001326 ORTHO05D004163 1.3e-07 60.5 83 39.8
Nitab4.5_0003035g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 1.3e-07 60.5 84 40.5
Psat0s3164g0120 Pisum sativum HOM05D001326 ORTHO05D004163 1.7e-07 60.1 83 41.0
Aqoxy5G01135 Aquilegia oxysepala HOM05D001326 ORTHO05D004163 2.2e-07 59.7 86 38.4
Lalb_Chr22g0354841 Lupinus albus HOM05D001326 ORTHO05D004163 2.2e-07 59.7 104 34.6
CANSAT25G2642 Cannabis sativa HOM05D001326 ORTHO05D004163 2.9e-07 59.3 119 31.9
Glyma.06G043700 Glycine max HOM05D001326 ORTHO05D004163 2.9e-07 59.3 83 39.8
Gohir.A01G121500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 2.9e-07 59.3 83 38.6
Nitab4.5_0004888g0020 Nicotiana tabacum HOM05D001326 ORTHO05D004163 3.8e-07 58.9 97 36.1
SalBow6G1031 Salvia bowleyana HOM05D001326 ORTHO05D004163 4.9e-07 58.5 83 42.2
Medtr1g018710 Medicago truncatula HOM05D001326 ORTHO05D004163 6.4e-07 58.2 106 34.9
VMungo1309G2681 Vigna mungo HOM05D001326 ORTHO05D004163 6.4e-07 58.2 107 33.6
Cc10_g05200 Coffea canephora HOM05D001326 ORTHO05D004163 8.4e-07 57.8 99 36.4
HanXRQChr05g0150481 Helianthus annuus HOM05D001326 ORTHO05D004163 8.4e-07 57.8 88 37.5
Sopen04g031970 Solanum pennellii HOM05D001326 ORTHO05D004163 8.4e-07 57.8 83 38.6
PGSC0003DMG400003309 Solanum tuberosum HOM05D001326 ORTHO05D004163 8.4e-07 57.8 83 38.6
Thecc.08G095300 Theobroma cacao HOM05D001326 ORTHO05D004163 8.4e-07 57.8 83 38.6
Ca_15925_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 1.1e-06 57.4 83 38.6
Dinv39258 Davidia involucrata HOM05D001326 ORTHO05D004163 1.1e-06 57.4 95 31.6
Migut.N02754 Erythranthe guttata HOM05D001326 ORTHO05D004163 1.1e-06 57.4 88 38.6
Prupe.1G429000 Prunus persica HOM05D001326 ORTHO05D004163 1.1e-06 57.4 98 37.8
Solyc04g078380.3 Solanum lycopersicum HOM05D001326 ORTHO05D004163 1.1e-06 57.4 83 38.6
SGA_v2.0_scaffold28G11812 Striga asiatica HOM05D001326 ORTHO05D004163 1.1e-06 57.4 83 42.2
TPR.G25586 Trifolium pratense HOM05D001326 ORTHO05D004163 1.1e-06 57.4 83 38.6
Lj1g0010090 Lotus japonicus HOM05D001326 ORTHO05D004163 1.4e-06 57.0 98 35.7
SGA_v2.0_scaffold14G06954 Striga asiatica HOM05D001326 ORTHO05D004163 1.4e-06 57.0 83 41.0
TWI36G1533 Tripterygium wilfordii HOM05D001326 ORTHO05D004163 1.4e-06 57.0 89 36.0
CSS0008374 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D004163 1.9e-06 56.6 95 35.8
Ciclev10002480m.g Citrus clementina HOM05D001326 ORTHO05D004163 1.9e-06 56.6 83 37.3
DCAR_008838 Daucus carota HOM05D001326 ORTHO05D004163 1.9e-06 56.6 85 38.8
Migut.O00599 Erythranthe guttata HOM05D001326 ORTHO05D004163 1.9e-06 56.6 106 34.9
AUR62044632 Chenopodium quinoa HOM05D001326 ORTHO05D004163 2.4e-06 56.2 91 36.3
Nitab4.5_0011741g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 2.4e-06 56.2 83 38.6
Oeu036969.1 Olea europaea HOM05D001326 ORTHO05D004163 2.4e-06 56.2 104 33.7
QL02p003371 Quercus lobata HOM05D001326 ORTHO05D004163 2.4e-06 56.2 83 37.3
COL.COLO4_28576 Corchorus olitorius HOM05D001326 ORTHO05D004163 3.2e-06 55.8 83 37.3
Lalb_Chr14g0368421 Lupinus albus HOM05D001326 ORTHO05D004163 3.2e-06 55.8 106 35.8
CsaV3_4G034780 Cucumis sativus L. HOM05D001326 ORTHO05D004163 4.2e-06 55.5 98 33.7
TAR625G0613 Trochodendron aralioides HOM05D001326 ORTHO05D004163 4.2e-06 55.5 94 34.0
CAN.G107.48 Capsicum annuum HOM05D001326 ORTHO05D004163 5.5e-06 55.1 83 36.1
CAN.G1621.9 Capsicum annuum HOM05D001326 ORTHO05D004163 5.5e-06 55.1 83 37.3
ClCG05G020300 Citrullus lanatus HOM05D001326 ORTHO05D004163 5.5e-06 55.1 98 33.7
MELO3C016792.2 Cucumis melo HOM05D001326 ORTHO05D004163 5.5e-06 55.1 98 33.7
Thhalv10003281m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 5.5e-06 55.1 81 42.0
VMungo0647G1866 Vigna mungo HOM05D001326 ORTHO05D004163 5.5e-06 55.1 95 38.9
EL10As7g23801 Beta vulgaris HOM05D001326 ORTHO05D004163 7.1e-06 54.7 94 34.0
Ca_13253_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 7.1e-06 54.7 97 33.0
Glyma.17G237500 Glycine max HOM05D001326 ORTHO05D004163 7.1e-06 54.7 96 35.4
Oeu016580.1 Olea europaea HOM05D001326 ORTHO05D004163 7.1e-06 54.7 83 39.8
Sed0004426 Sechium edule HOM05D001326 ORTHO05D004163 7.1e-06 54.7 93 34.4
MSTRG.25063 Avicennia marina HOM05D001326 ORTHO05D004163 9.3e-06 54.3 83 38.6
CiPaw.15G049900 Carya illinoinensis HOM05D001326 ORTHO05D004163 9.3e-06 54.3 88 36.4
Hma1.2p1_0634F.1_g192950 Hydrangea macrophylla HOM05D001326 ORTHO05D004163 9.3e-06 54.3 86 37.2
Medtr3g102500 Medicago truncatula HOM05D001326 ORTHO05D004163 9.3e-06 54.3 87 37.9


User provided reference genes

Program Settings