Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 2.2e-213 745.3 374 100.0
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 9.6e-193 676.8 373 90.9
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 2.4e-191 672.2 377 88.6
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 5.3e-191 671.0 373 89.8
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 9.0e-191 670.2 373 89.8
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 6.4e-189 664.1 373 89.3
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 4.2e-188 661.4 377 88.3
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 2.1e-179 632.5 372 85.5
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 9.0e-175 617.1 380 78.9
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.5e-158 563.1 374 74.1
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.7e-157 559.7 375 74.4
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.9e-156 556.2 375 73.9
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 3.2e-156 555.4 376 73.9
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 6.1e-155 551.2 372 72.8
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.4e-154 550.1 375 73.1
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 5.7e-153 544.7 378 72.8
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 5.7e-153 544.7 378 72.8
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 9.7e-153 543.9 380 73.4
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 3.7e-152 542.0 381 72.2
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 3.7e-152 542.0 385 70.4
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 8.2e-152 540.8 382 72.0
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.1e-151 540.4 381 71.7
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.8e-151 539.7 375 73.6
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.4e-151 539.3 382 71.2
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 5.3e-151 538.1 381 72.7
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 9.1e-151 537.3 369 72.4
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 7.7e-150 534.3 379 71.2
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.7e-149 533.1 372 72.6
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.7e-149 533.1 373 70.5
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 5.0e-149 531.6 377 71.6
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.1e-148 530.4 395 69.4
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.9e-148 529.6 382 69.1
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.5e-148 529.3 387 68.7
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 2.5e-148 529.3 395 68.6
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.2e-148 528.9 378 70.6
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.2e-148 528.9 372 71.8
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.2e-148 528.5 378 70.6
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 5.5e-148 528.1 371 70.4
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.5e-148 528.1 371 70.4
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 7.2e-148 527.7 386 69.7
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 7.2e-148 527.7 310 81.0
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 9.4e-148 527.3 382 70.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.1e-147 526.2 310 80.6
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.6e-147 525.4 378 70.1
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.6e-147 525.4 384 70.6
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 4.7e-147 525.0 379 70.7
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 4.7e-147 525.0 333 75.7
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 6.1e-147 524.6 386 68.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.4e-146 523.5 381 70.1
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 2.3e-146 522.7 379 69.9
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 4.0e-146 521.9 377 70.0
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 5.2e-146 521.5 386 67.9
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.5e-145 520.0 375 69.6
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.5e-145 520.0 391 68.3
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 2.0e-145 519.6 387 68.5
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 4.4e-145 518.5 357 71.1
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 4.4e-145 518.5 336 75.6
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 5.7e-145 518.1 299 81.3
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.3e-144 516.9 333 73.9
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 8.2e-144 514.2 333 73.3
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.4e-143 512.7 425 63.8
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 4.1e-143 511.9 374 68.4
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 5.3e-143 511.5 357 71.4
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 5.3e-143 511.5 357 71.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 9.1e-143 510.8 385 67.0
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.2e-142 510.4 303 79.2
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 2.0e-142 509.6 375 69.3
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.0e-141 507.3 385 66.8
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 8.5e-141 504.2 375 68.8
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.1e-140 503.8 386 67.4
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 3.2e-140 502.3 351 70.4
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 2.1e-139 499.6 422 62.3
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 2.1e-139 499.6 379 66.2
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 8.0e-139 497.7 374 69.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 2.6e-137 492.7 454 58.8
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.4e-137 491.9 372 67.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.7e-136 490.0 304 75.3
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.7e-136 490.0 381 65.6
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.7e-136 488.8 360 65.0
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-135 487.3 386 64.0
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.8e-135 486.5 382 63.1
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.3e-132 475.7 381 64.8
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 9.5e-132 474.2 283 78.8
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 2.3e-130 469.5 489 53.2
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 3.0e-130 469.2 373 64.1
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 8.9e-130 467.6 381 64.3
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.0e-129 466.5 387 62.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 4.4e-129 465.3 395 62.3
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.2e-128 463.0 378 62.2
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.8e-128 462.6 296 74.7
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 5.4e-127 458.4 292 75.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 3.8e-125 452.2 306 68.0
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.6e-123 445.7 374 62.0
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 8.0e-123 444.5 387 60.2
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.4e-122 443.7 387 60.5
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 8.3e-120 434.5 228 92.1
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 8.9e-114 414.5 310 66.8
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 1.3e-112 410.6 213 92.5
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 1.3e-112 410.6 213 92.5
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.9e-112 409.5 213 92.0
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.9e-108 396.7 374 58.8
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 4.4e-105 385.6 339 55.5
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 9.9e-105 384.4 293 61.8
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 1.3e-104 384.0 312 66.0
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 2.7e-102 376.3 293 59.4
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 3.2e-95 352.8 293 55.6
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 6.6e-93 345.1 213 76.1
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 8.7e-93 344.7 227 68.7
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.4e-89 332.8 251 67.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 2.0e-81 307.0 287 50.2
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.4e-79 300.8 296 55.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.1e-76 291.2 230 63.5
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.7e-72 277.3 177 72.9
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 6.4e-72 275.4 285 46.7
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 5.1e-69 265.8 285 45.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.3e-64 251.1 278 45.3
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.7e-62 243.4 157 75.2
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.8e-58 230.7 159 76.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 6.5e-56 222.2 135 77.8
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 8.5e-40 168.7 161 49.1
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.1e-36 158.3 117 65.8
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.8e-34 151.0 166 54.2
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 4.1e-34 149.8 108 63.9
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 1.8e-29 134.4 97 66.0
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.3e-24 118.2 87 59.8
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 9.8e-20 102.1 64 76.6
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 9.1e-18 95.5 48 89.6
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 9.1e-18 95.5 48 89.6
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 5.9e-09 66.2 43 74.4
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 3.3e-07 60.5 105 36.2


User provided reference genes

Program Settings