Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 4.1e-122 441.4 224 100.0
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 2.2e-75 286.2 163 87.7
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 9.2e-74 280.8 164 87.2
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.6e-73 280.0 163 86.5
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.6e-73 280.0 163 86.5
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 2.0e-73 279.6 163 87.1
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.6e-70 270.0 163 84.7
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 3.7e-67 258.8 163 81.6
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.2e-65 253.8 163 81.6
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 2.7e-65 252.7 163 80.4
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 2.7e-65 252.7 163 80.4
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 2.7e-65 252.7 163 80.4
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 7.8e-65 251.1 166 77.7
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-64 250.4 163 77.3
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 8.4e-59 231.1 187 66.3
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.9e-58 229.9 164 71.3
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 2.4e-58 229.6 161 70.8
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.7e-57 226.1 167 72.5
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.5e-57 225.7 164 70.7
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 4.6e-57 225.3 167 70.7
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 4.6e-57 225.3 163 69.3
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 7.8e-57 224.6 163 69.3
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 7.8e-57 224.6 167 70.1
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 2.3e-56 223.0 165 70.9
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.0e-56 222.6 163 68.7
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.9e-56 222.2 164 70.1
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 5.1e-56 221.9 164 68.9
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 5.1e-56 221.9 162 70.4
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 6.6e-56 221.5 159 69.8
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 6.6e-56 221.5 161 67.1
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 8.6e-56 221.1 161 68.9
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.1e-55 220.7 159 68.6
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.9e-55 219.9 161 66.5
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 1.9e-55 219.9 162 71.0
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 3.3e-55 219.2 163 72.4
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 5.6e-55 218.4 163 69.9
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.6e-55 218.4 159 67.9
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.6e-55 218.4 159 67.9
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 5.6e-55 218.4 159 67.9
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 7.3e-55 218.0 160 71.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 1.2e-54 217.2 159 71.1
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.6e-54 216.9 159 67.3
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.6e-54 216.9 159 67.9
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.6e-54 216.9 159 67.9
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.6e-54 216.9 164 69.5
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 3.6e-54 215.7 164 66.5
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 4.7e-54 215.3 167 67.7
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 4.7e-54 215.3 153 68.6
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 6.2e-54 214.9 159 69.2
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 8.1e-54 214.5 163 69.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.1e-53 214.2 162 70.4
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.1e-53 214.2 160 71.2
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 1.4e-53 213.8 161 65.8
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 1.8e-53 213.4 159 68.6
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.8e-53 213.4 161 67.7
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.8e-53 213.4 159 68.6
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.4e-53 213.0 162 66.7
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 3.1e-53 212.6 167 65.3
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 6.8e-53 211.5 155 69.7
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 8.9e-53 211.1 162 67.3
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.2e-52 210.7 163 67.5
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 1.2e-52 210.7 158 68.4
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.5e-52 210.3 120 83.3
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.0e-52 209.9 155 67.7
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 2.0e-52 209.9 161 64.0
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 2.0e-52 209.9 164 63.4
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 2.6e-52 209.5 161 67.7
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 2.6e-52 209.5 163 65.6
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 3.4e-52 209.1 162 67.3
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 4.4e-52 208.8 120 81.7
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 4.4e-52 208.8 120 81.7
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 7.6e-52 208.0 164 64.6
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 9.9e-52 207.6 165 67.3
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 9.9e-52 207.6 164 67.7
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.7e-51 206.8 141 73.8
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 2.9e-51 206.1 159 69.2
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 3.8e-51 205.7 159 66.7
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 3.8e-51 205.7 164 68.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.1e-50 204.1 165 66.1
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.1e-50 204.1 164 66.5
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.4e-50 203.8 160 65.6
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.4e-50 203.0 164 65.9
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.2e-50 202.6 141 68.1
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 1.2e-49 200.7 159 66.7
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.6e-49 200.3 160 65.6
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 7.8e-49 198.0 162 62.3
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 7.8e-49 198.0 160 63.1
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 1.0e-48 197.6 158 63.3
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.0e-48 197.6 160 63.8
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 2.3e-48 196.4 160 63.8
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 2.3e-48 196.4 160 63.8
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 3.9e-48 195.7 164 61.0
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 5.1e-48 195.3 155 62.6
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 8.7e-48 194.5 120 77.5
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.5e-47 193.7 163 59.5
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 1.5e-47 193.7 146 66.4
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 1.5e-47 193.7 159 61.6
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 2.5e-47 193.0 120 75.8
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 4.3e-47 192.2 139 67.6
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 7.3e-47 191.4 158 62.7
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 7.3e-47 191.4 158 64.6
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.6e-46 190.3 152 63.8
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.8e-46 189.5 159 62.3
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 2.8e-46 189.5 118 72.9
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 8.1e-46 188.0 163 61.3
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 1.2e-41 174.1 167 58.7
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 3.0e-40 169.5 144 61.8
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 3.6e-38 162.5 140 59.3
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.1e-37 161.0 109 70.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.2e-36 157.5 112 75.0
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.8e-35 152.5 91 79.1
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.6e-33 147.1 120 55.8
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.3e-31 139.0 134 49.3
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 9.0e-29 131.3 84 75.0
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 7.6e-28 128.3 90 73.3
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 7.6e-28 128.3 162 45.7
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.7e-27 127.1 90 73.3
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.5e-26 123.2 76 69.7
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.6e-17 94.0 102 48.0
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 7.4e-15 85.1 49 81.6
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 3.7e-14 82.8 49 81.6
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 4.8e-14 82.4 164 40.9
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 6.3e-14 82.0 153 34.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.5e-12 77.4 134 34.3
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.1e-07 61.2 151 31.1


User provided reference genes

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